Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07893 ATGGAGACATTTTCCACGGTTTCAATCTCTGTTCTGACAGTGATTGTTGCTGTGATTCCAATATGGGGATGGCTGATGCTGAACTCGTTGTGGCTGAGGCCAAAGAGGTTGGAAAAGCTTCTTAGAGCACAAGGTCTTCAAGGCGAGTCTTATAAGCTTTCTTCACTTGATGACTCGAAGCAAAAGCATATACAGAAAATGCAACAAGAAGCCAAATCCAAACCTATTGCTCTTTCCAATGATGTTGCTCCACAAATCTTCACCTCTGTTTACCAAACTATCAACCAATATGGCAAGAATTCCTTTTTATGGGAAGGTACAACACCAAAGGTGATTATCACAGAGCCGGAACAAATCAAAGAAGTCTTTAATAAGATTCATGACTTCTCTAAACCAAAGTTCAATTCCATTATCAAGCTTTTGATCGTTGGTTTGGTACAATATAACGGTGAAAAATGGGCTAAACATCGAAAGATTATTAACCCAGCATTCCATCTCGATAAATTAAAAAATATGCTGCCAGCATTTTTAGAAAGCGGCCATGATATGATTAGCAAGTGGAAGGAAATGTTGTCATCAGATGGAACATGTGAAATTGATGTTTGGCCTTTCCTTCAGAATTTGACTTGTGATGTAATTTCTAGAACAGCATTTGGAAGTAGCTATGCAGAAGGAACAAAAATTTTTGGACTTCTGAAAAGGCAGGGATATCTTTTAATGACAGCAGTGCACACGCACATTCCAATGTGGTGGCTTCTACCAACAAGTACCAAAAGGAGGATGAAGGAAATGGATAGAGATATTTATAATTCAGTTGAGGGTATCATTAAAAAACGAGAGACTGCTATGAAGAATGGAGAAGCCATCAAAGATGATTTATTAGGCATACTTTTGGAATCAAATCACATTGAAAATCAAGGACATGAAAACAGTAAGACTGGTGGAATGACCAATGAAGAAGTAATGAAGGAATGCAAGGCATTCTACAATGCAGGGCAAGAGACCACTTCAACTTTGTTGGTTTGGACAATGGTATTATTGGCTAGGTATCCTGAATGGCAAGCACGTGCGAGGGAGGAAGTTTTGCAAGTTTTTGGCAACCAAAATCCCAACTTTAATGGGTTAAGTCAACTTAAAATTGTGACTATGGTTTTATATGAGGTTCTCAGGTTATATCCACCAACAGTTTACTTCACTCGAGCTGTTGAAAAGGATTTGAAACTTGGAAACCTATCATTACCTGCAGGAATACAGGTTTCCATACCAATACTTTTGCTTCACCATGATCGTGATATATGGGGTGATGATGCAAAGGAGTTCAAACCTGAACGATTCTCAGAAGGAATTGCAAAGGTCACGAAAGGTCAAGTTTCATATTTCCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTTGCCTTATTGGAAGCTAAAATAGTATTGTCATTGCTTCTGCAAAATTTCTCATTTGAGCTTTCTGCGGCCTATACACATGCTCCCACCCCTGTGCTTTCTTTGCAGCCAAAACATGGGGCGCAACTCATTCTGCATAAATTGGAATGA 1569 0.3901 METFSTVSISVLTVIVAVIPIWGWLMLNSLWLRPKRLEKLLRAQGLQGESYKLSSLDDSKQKHIQKMQQEAKSKPIALSNDVAPQIFTSVYQTINQYGKNSFLWEGTTPKVIITEPEQIKEVFNKIHDFSKPKFNSIIKLLIVGLVQYNGEKWAKHRKIINPAFHLDKLKNMLPAFLESGHDMISKWKEMLSSDGTCEIDVWPFLQNLTCDVISRTAFGSSYAEGTKIFGLLKRQGYLLMTAVHTHIPMWWLLPTSTKRRMKEMDRDIYNSVEGIIKKRETAMKNGEAIKDDLLGILLESNHIENQGHENSKTGGMTNEEVMKECKAFYNAGQETTSTLLVWTMVLLARYPEWQARAREEVLQVFGNQNPNFNGLSQLKIVTMVLYEVLRLYPPTVYFTRAVEKDLKLGNLSLPAGIQVSIPILLLHHDRDIWGDDAKEFKPERFSEGIAKVTKGQVSYFPFGWGPRICIGQNFALLEAKIVLSLLLQNFSFELSAAYTHAPTPVLSLQPKHGAQLILHKLE. 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07893 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Seca3g07893 522 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 SUPERFAMILY Cytochrome P450 85 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 Gene3D Cytochrome P450 78 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07893 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 514 - -
Seca3g07893 522 CDD CYP72 90 517 - -
Seca3g07893 522 FunFam Cytochrome P450 734A1 31 522 - -
Seca3g07893 522 Pfam Cytochrome P450 88 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07893 Seca-Chr3 198674260 198677178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07893 6 521 Cytochrome P450 AT3G14690 52.317 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07893 - K17873 ag:BAL45207 798.89