Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07861 ATGAAGCAATTGATTCGCAAGCTGTCCCGAGTCGCCGACTCGTCGCAGCAGTACACGCTCCTCCGATCCGAGTCACGGCGACCGCATCGCGCCGAGTCTTTCCGGCGGAAACGAGGCGCGGCGGTGCCGGAGGGTCACGTGCCGGTCTACGTTGGAGAGGAGATGGAGCGGTTCGTTGTGAGCGCGGAGCTTCTGAACCACCCGGTTTTCGTGAAGCTCCTGAACCGGTCGGCTCAGGAGTACGGTTACGAGCAGAAAGGTGTGCTTCGAATCCCATGCCACGTCATCATCTTCGAACGAGTCCTCGAAGCGCTTCAACTCGGCCACGACTCGGGTGACATCCACGACCTCCTTAGCTCCTCTGAAGAATATTGCTAG 378 0.5952 MKQLIRKLSRVADSSQQYTLLRSESRRPHRAESFRRKRGAAVPEGHVPVYVGEEMERFVVSAELLNHPVFVKLLNRSAQEYGYEQKGVLRIPCHVIIFERVLEALQLGHDSGDIHDLLSSSEEYC. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07861 125 MobiDBLite consensus disorder prediction 19 39 - -
Seca3g07861 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 101 IPR003676 GO:0009733
Seca3g07861 125 Pfam Auxin responsive protein 7 105 IPR003676 GO:0009733
Seca3g07861 125 MobiDBLite consensus disorder prediction 23 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07861 Seca-Chr3 196969885 196970262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07861 40 106 Calmodulin-binding Proteins AT2G24400 43.284 4.58e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07861 K14488 - cave:132175866 186.422