Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07828 ATGTTTGGGGATGAGGAAGTCCAGCCCTGGAAGCCATTCAGAGATAAACTGGAAACAATCATGGTAATGCTTGATAAACGTTACATTGATGATTCTAGTTTTACTTGGTTTAGGGATACACATAAGGTGTTTGATAATTTGTCTGAGAGGCTAACTGTGAACGTGGATGTACTCCAAATGTGGGTTATGATCTCTAATTTCAAGTTAGCATACAATCTTCTTCGTCGCCCTGATGGAACTTTCAACCGTGACTTAGCAGAGCTCCTTGATCGGAATGTTTCTGCAAATACTAACCCTGTGGATGGAGTGTTCTCTTTTGATGTTATTGTGGACAGGGAAACGAATCTACTTACTCGAATCTACCGGCCTACTGAGGGAGAAGATAGTCGTGTGAATATTGTTGACCTTGAGAAACCTGTGACCTCTGAGGTTCTTGCTGTCATCATTTTCTTTCACGGTGGAAGCTTTGCACACTATTCAGCTAACAGTGCTATATATGACACCCGCTTGGTAGGTATATGTAAGGCTGTTGTTGTCTCTGTGAATTATAGGCGTGCACTTGAAAATAGGTACCCTTGTGCATATGAAGATGAGAAACGTGTAGATGGGAGATACTTTGTGAGAGTTCAAGATCGAGACTGTCACCAGGTTCGTCAGAACCATCAAGCTGGACAGAATACACCTTTATCCCCTATACACAAGGTGTTCAATCCTCTAGCATTTGCTTTAAGGAGAAAGCTCAAGGAAGCAGTAGATATTCTCCTGCAACAGGTTTAA 777 0.4196 MFGDEEVQPWKPFRDKLETIMVMLDKRYIDDSSFTWFRDTHKVFDNLSERLTVNVDVLQMWVMISNFKLAYNLLRRPDGTFNRDLAELLDRNVSANTNPVDGVFSFDVIVDRETNLLTRIYRPTEGEDSRVNIVDLEKPVTSEVLAVIIFFHGGSFAHYSANSAIYDTRLVGICKAVVVSVNYRRALENRYPCAYEDEKRVDGRYFVRVQDRDCHQVRQNHQAGQNTPLSPIHKVFNPLAFALRRKLKEAVDILLQQV. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07828 258 Pfam alpha/beta hydrolase fold 148 197 IPR013094 GO:0016787
Seca3g07828 258 SUPERFAMILY alpha/beta-Hydrolases 91 197 IPR029058 -
Seca3g07828 258 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 148 164 IPR002168 GO:0016787
Seca3g07828 258 Gene3D alpha/beta hydrolase 41 201 IPR029058 -
Seca3g07828 258 PANTHER ARYLACETAMIDE DEACETYLASE 77 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07828 Seca-Chr3 195635573 195636349 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07828 58 197 Carbohydrate Esterase AT3G05120 70.139 5.71e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07828 K14493 - gmx:100815161 244.202