Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07827 ATGTTTGGGGATGAGGAAGTCCAGCCCTGGAAGCCATTCAGAGATAAACTGGAAACAATCATGGTAATGCTTGATAAACGTTACATTGATGATTCTAGTTTTACTTGGTTTAGGGATACACATAAGGTGTTTGATAATTTGTCTGAGAGGCTAACTGTGAACGTGGATGTACTCCAAATGTGGGTTATGATCTCTAATTTCAAGTTAGCATACAATCTTCTTCGTCGCCCTGATGGAACTTTCAACCGTGACTTAGCAGAGCTCCTTGATCGGAATGTTTCTGCAAATACTAACCCTGTGGATGGAGTGTTCTCTTTTGATGTTATTGTGGACAGGGAAACGAATCTACTTACTCGAATCTACCGGCCTACTGAGGGAGAAGATAGTCGTGTGAATATTGTTGACCTTGAGAAACCTGTGACCTCTGAGGTTCTTGCTGTCATCATTTTCTTTCACGGTGGAAGCTTTGCACACTATTCAGCTAACAGTGCTATATATGACACCCGCTTGGTAGGTATATGTAAGGCTGTTGTTGTCTCTGTGAATTATAGGCGTGCACTTGAAAATAGGTACCCTTGTGCATATGAAGATGAGAAACGTGTAGATGGGAGATACTTTGTGAGAGTTCAAGATCGAGACTGTCACCAGGTTCGTCAGAACCATCAAGCTGGACAGAATACACCTTTATCCCCTATACACAAGGTGTTCAATCCTCTAGCATTTGCTTTAAGGAGAAAGCTCAAGGAAGCAGTAGATATTCTCCTGCAACAGGAAACGAATCTACTTACTCGAATCTACCGGCGTGCTGAGGGAGAAGATAGTCGTGTGAATATTGTTGACCTTGAGAAGCCTGTGACCTCTGAGGTTCTTGCTGTCATCATTTTCTTTCACGGTGGAAGCTTTGCACACTATTCAGCTAACAGTGCTATATATGACACCCGCTTGGTAGGTATATGTAAGGCTGTTGCTGTCTCTGTGAATTATAGGCGTGCACTTGAAAACAGGTACCCTTGTGCATATGAAGATGAGAAACGTCTAGATGGGAGATACTTTGTGAGAGTTCAAGATCGAGACTGTCACCCGGTTCTTCAGAACCATCAAGCTGGAAAAAATACACCTTTATCCCCTATACACAAGGTGTTCAATCCTCTAGCATTTGCTTTAAGGAGAAAGCTCAAGGAAGCAGTAGATATTCTCCTGCAACAATCACCTTTGGCTCTTGCAAAAGCTTTAAAGAACCCAGTTGAAGTGGATGGGTTGAAGAAGGCACATATTGGGGTGGTGCTTCCATTGTTCAATTAA 1302 0.4263 MFGDEEVQPWKPFRDKLETIMVMLDKRYIDDSSFTWFRDTHKVFDNLSERLTVNVDVLQMWVMISNFKLAYNLLRRPDGTFNRDLAELLDRNVSANTNPVDGVFSFDVIVDRETNLLTRIYRPTEGEDSRVNIVDLEKPVTSEVLAVIIFFHGGSFAHYSANSAIYDTRLVGICKAVVVSVNYRRALENRYPCAYEDEKRVDGRYFVRVQDRDCHQVRQNHQAGQNTPLSPIHKVFNPLAFALRRKLKEAVDILLQQETNLLTRIYRRAEGEDSRVNIVDLEKPVTSEVLAVIIFFHGGSFAHYSANSAIYDTRLVGICKAVAVSVNYRRALENRYPCAYEDEKRLDGRYFVRVQDRDCHPVLQNHQAGKNTPLSPIHKVFNPLAFALRRKLKEAVDILLQQSPLALAKALKNPVEVDGLKKAHIGVVLPLFN. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07827 433 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 293 309 IPR002168 GO:0016787
Seca3g07827 433 SUPERFAMILY alpha/beta-Hydrolases 225 342 IPR029058 -
Seca3g07827 433 SUPERFAMILY alpha/beta-Hydrolases 91 197 IPR029058 -
Seca3g07827 433 PANTHER ARYLACETAMIDE DEACETYLASE 83 197 - -
Seca3g07827 433 Gene3D alpha/beta hydrolase 41 201 IPR029058 -
Seca3g07827 433 Gene3D alpha/beta hydrolase 211 346 IPR029058 -
Seca3g07827 433 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 148 164 IPR002168 GO:0016787
Seca3g07827 433 Pfam alpha/beta hydrolase fold 148 197 IPR013094 GO:0016787
Seca3g07827 433 Pfam alpha/beta hydrolase fold 293 342 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07827 Seca-Chr3 195631424 195634318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07827 250 371 Carbohydrate Esterase AT3G05120 49.618 1.84e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07827 K14493 - gmx:100815161 244.202