Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07795 ATGAGGAAGAAGCTCGATACCCGTTTCCCTGCTGCTCGGATAAAGAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCGGTTCCTGTTTTAGTGTCTGACTTTTTTTTTCCATATGTTGTTGACGTCACTCTTGAATATTTTACAGCTAAAGCTCTGGAATTATTTTTGCAAGATCTTTGTGACCGCACATATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATGCACTGCATTTGAAACATTGTGTGCAAAGCTATAATGTCTTTGACTTTCTGAGAGACATTGTCAGTAGGGTTCCTGACTATGGGCATGGCCATGGCCATGGCCATTCTGAGGCTGGAGCTGATGATCGTGCCCTTCCAAAGAGAAGGAAAGCTGCTGGTGATGATTGCAATGACAGTGATGAAGAGGCTAAGAGGAGTAAGATGCTTGAGTTGGGCCACACTGGTGGTACTGGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGCCGTGGTCGAGGGGCTCGAACTGTAGAAAGGGAGACCTTTCATCAGCAAGTTGAATCTGAGCCTTGCACCTCTGTTCAGCAAAGTAGCAAAGATGTTCCTATTACAAGTGTGGCAGTGGATAATGGTCCAGAGTCAAAGGAGTTGTCAAAGGAGAGCACAGCAGTTGCTGAGGAAAGTGCTCAATCTCTCCGTAACATTGATCTGAATGCCAACTTAAATGAAAACGAGGACAAAAATGCTAGCACAGCAGCTCAGGCCTCATTGCCTGAACCTGCCACAACAGAGATTAAGCATGAAGAAATTCCAGGTTGGTCCCTTTCTGATGTGGACAAGATGGCCATTGACACCATGCAGCTAGCAAACCTTGGTAGTCGACTAGAAGAGGATGAGGAAGATTATGATGAGGAAGGGTAA 918 0.4564 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSDFFFPYVVDVTLEYFTAKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSRVPDYGHGHGHGHSEAGADDRALPKRRKAAGDDCNDSDEEAKRSKMLELGHTGGTGRGRGRGRGRGRGRGARTVERETFHQQVESEPCTSVQQSSKDVPITSVAVDNGPESKELSKESTAVAEESAQSLRNIDLNANLNENEDKNASTAAQASLPEPATTEIKHEEIPGWSLSDVDKMAIDTMQLANLGSRLEEDEEDYDEEG. 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07795 305 FunFam dr1-associated corepressor homolog 1 103 - -
Seca3g07795 305 MobiDBLite consensus disorder prediction 245 269 - -
Seca3g07795 305 Coils Coil 287 305 - -
Seca3g07795 305 MobiDBLite consensus disorder prediction 170 184 - -
Seca3g07795 305 SUPERFAMILY Histone-fold 4 107 IPR009072 GO:0046982
Seca3g07795 305 Gene3D Histone, subunit A 1 89 IPR009072 GO:0046982
Seca3g07795 305 MobiDBLite consensus disorder prediction 185 203 - -
Seca3g07795 305 MobiDBLite consensus disorder prediction 108 220 - -
Seca3g07795 305 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 137 - -
Seca3g07795 305 MobiDBLite consensus disorder prediction 108 149 - -
Seca3g07795 305 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 43 IPR003958 -
Seca3g07795 305 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 53 88 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07795 Seca-Chr3 194752994 194759932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07795 1 294 CCAAT-HAP5 Transcription Factor Family AT3G12480 48.852 4.56e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07795 K21752 - gmx:100810093 429.098