Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07762 ATGGATTTAAATAGTGATGATTCGGTTGTTAATCTGGAAGATGATAGAGACCTAAGTTATAATGATTCTTCTAGCTCTAGCGATAATGAGAATCATAATGAAAATGATAGAGTAACAGATACTGAGGATGAAGTTAATGAAGAAGAGGTAGACACTGATGAGGTAAATGAATTTATGGATGCAGAAGTTGGAGGGGAGGTGTCAAGGAGGATAATTGATTTGACAAATGATGATATATGGGCATTGGAATTCTGTACTGAAAATGATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTCATGGATTTGCTGTGAGGAGGGATGATGTAATTAAAGACAGTAAAGGTATGGTCATAATGCGACAGTTCTTATGTAGTAGGGCTGGTTTGAGGGACCAAAAGCATTTGATTAGATTAGATCGGAAAAAGGAACATAAGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGCTTTGATTATAAGACTGGGAAATTTAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGATTTGACCTCTGCTAAATTTGTTCCTTTAATGCCTGCATATCGTGGTTTGAGTGATGGCGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCTTGTCAAATAATGTGTTTTCTTGTTGATAAAAAAGGAGGATATAGAAACGTTGGTTTTTCAAAGAAAGGTTTATACAACTACATAGATGAGGTTAGGAGGGGTAAGATAAAAGATGGGGATGCAGTGGTTGGGTTAAGTTATTTGCAAGGAAAGGCAGATAACAATCCAATGTTTTTTTCAAGATTTTTATGTTCTGAGGATGGGAAACTCACTCATTTGTTTTGGTGTGATGAAATAAGTCGGGCAGACTATCAATTTTTTGGTGATGTGCTTGCATTTGATGCAACCTACAAGAAGAATAGGTATAAATATCCACTGGTGATTTTTTCTGGTAAAAATCACCACTCTCAGACAGTTATATTTGGGTGTGCACTCATTGCTGATGAAACAATCGATACTTATAAGTGGGTTTTAAGAATGTTTTCAGAAGCAATGTTCAACAAGCATCCAGCTGCAGTTGTGACTGATGGTGATGGTGCGATGAGGGAAGCTATTAAGGTAGTTTTTCCAAATGCTGCTCATAGGTTATGCAGGTGGCATTTGAATAAAAATGCATGTGAAAATGTTAAGAATCCTAAATTTTTGGATGATTTCAAGAAAGCAATGTACAGTAATTTCACACCAGAAAGATTTGAACAGTTTTGGGAGGAAATGGTAAATAAACATGGTCTACAAGGGAATAGATGGGTGTTGAAGACCTATGATATTAAGGAAATGTGGGCGTCTGCTTATTTGCGTGATAAATTCTTTGCCCGCATAAGAACTACATCTCAATGTGAAGGCATAAATTCGTTGATAAAAACCTATGTTAGGAGTAAGAATACAATTATTGAATTTATTTATAATTTTGAGCAATCTCTCAGGGAGTATAGGTACAAAGAACTGACTTCAGACTTTAATTCTCTGTATACTGTACCCGTTCTCACTACTTCACTTCAAAAGATTGAGAATCAAGCCTCTAAGGTTTTCACTTTGGATATTTTTAAAGATGTGAAGTATGAAATTGAAAAGGCAGGGGGATTAAATGTAATTGAACGTTCAGTAGATGGTGACAAATTGAATTTCAAATTAAATGAATATTATAAGCCTCGGAGTGAACATTTTGTTGTTTATGACAAAGAGAATTGTAAATTTATTTGTGATTGTCGGTTGTTTGAATCTTGTGGCATTATTTGTCAACACATTTTTTGTGCCATGAGACTTGAGCACATAGACGCTATACCCCCAAGTATGATTTGCAAGCGATGGAGGAAGAATGTTAAGAGTGACATGATGATAACTGATGGTTTGGATGAGGTAGAGCCTGATATGATGAGGGTGTGTCATTTTGTGCTTGCTAGTTCCCACTGTAACATTATTTGTGATATGGTTTCAAAAAAATGTGAGCATTTTAAGCAGTTCATTGGTGACATTATGAAGCTGAAGCAGAAGTATGAGAATCTGTGTTCCGTTAGTAGCACGAGTACTGTTGAGATAAATATTGTGCATGATCCCACTGTGGTGAAGACCAAAGGTGGTCCTATGAAGGCTAGGAAGAGGCGTAAGAGAAAGAGGTGTTCGAATTGTCAAACCAGTGGACATGTCATCACAACTTGTCCTAGGCTGGTTCCACCAGAAGATGAAGTCAACGTTAATCCTGAAGTTTCAGTAGCTGAGTCTGAGAGTCTAATGAAGGATGCTGACAATGTAATGTATTAG 2340 0.3662 MDLNSDDSVVNLEDDRDLSYNDSSSSSDNENHNENDRVTDTEDEVNEEEVDTDEVNEFMDAEVGGEVSRRIIDLTNDDIWALEFCTENDAFNFYFSYAKCHGFAVRRDDVIKDSKGMVIMRQFLCSRAGLRDQKHLIRLDRKKEHKPLTRTNCQAKLRVRFDYKTGKFKVVSFLDSHNHDLTSAKFVPLMPAYRGLSDGDKAQVDALHSHGVRPCQIMCFLVDKKGGYRNVGFSKKGLYNYIDEVRRGKIKDGDAVVGLSYLQGKADNNPMFFSRFLCSEDGKLTHLFWCDEISRADYQFFGDVLAFDATYKKNRYKYPLVIFSGKNHHSQTVIFGCALIADETIDTYKWVLRMFSEAMFNKHPAAVVTDGDGAMREAIKVVFPNAAHRLCRWHLNKNACENVKNPKFLDDFKKAMYSNFTPERFEQFWEEMVNKHGLQGNRWVLKTYDIKEMWASAYLRDKFFARIRTTSQCEGINSLIKTYVRSKNTIIEFIYNFEQSLREYRYKELTSDFNSLYTVPVLTTSLQKIENQASKVFTLDIFKDVKYEIEKAGGLNVIERSVDGDKLNFKLNEYYKPRSEHFVVYDKENCKFICDCRLFESCGIICQHIFCAMRLEHIDAIPPSMICKRWRKNVKSDMMITDGLDEVEPDMMRVCHFVLASSHCNIICDMVSKKCEHFKQFIGDIMKLKQKYENLCSVSSTSTVEINIVHDPTVVKTKGGPMKARKRRKRKRCSNCQTSGHVITTCPRLVPPEDEVNVNPEVSVAESESLMKDADNVMY. 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07762 779 PANTHER OS01G0519700 PROTEIN 81 732 - -
Seca3g07762 779 ProSiteProfiles Zinc finger SWIM-type profile. 582 617 IPR007527 GO:0008270
Seca3g07762 779 Pfam MULE transposase domain 304 398 IPR018289 -
Seca3g07762 779 MobiDBLite consensus disorder prediction 1 52 - -
Seca3g07762 779 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Seca3g07762 779 SMART 26again6 592 619 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07762 Seca-Chr3 193181786 193184125 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g07762 MULE 6.7e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07762 - - ccaj:109811679 822.387