Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07759 ATGAGTACAGAACCTCAAACAGTGGTGGTGATCCAAGATGCATCAAGAGATGTTAGTTTAAAGGCAATGGAAAGGGCCCTGAAAAAGTTATCTGTTAAAGCTGGAGATCAGCTTATAATTGTTGCTATTCTTGATTGGTTTAGCAGTCCCAGTACGTTTTCTTTCTTTGGAAGGAAGCCTTTGGGTTACAGTGTCAGCGTGGATTCCAGTTCATTTGTTGCAACAAACAAGAAAATCATTGATGAAAACCATAACAGGAAAAAGAAAGCCTATAGTAAGAACCGGTACATCAATGAGCTCTCTGAGTACTGTAAAATGAACAAGATTGAATTCCAAACAGAAGTGCTTATAGGCCCTGCTGCTCAGGTTATTTCTGAGGCTGCAAGAAAATTTCGTGCTACAAGTTTGATACTTGATAGACAGATGCACAAAGATAAGAAGTATTTCATGCACCGGATCCGTTGTGGTATGTATAGGATAACAAGTGACAACTCCATTGAAAAGTTGAAAGATCCGAATTCAACAGCCACCAAACTTGCTGAAAGGCAAGAAAATGTAAGCTATGGAGAAATGATACCAGGAAGCACTGAGGAAGCAGTTTCTATTCAGATGTCCAGGTCCTCATCAAGTGATCTGTTCACATTAACTGGAGTTTCAAGTCAGTGGAGTACTGAAGCCTCTACTTCTAGCATTGGTGGAAGTTCACAATATGTAGAACAAGAAACAAAAGAGAACCGATCACTATTTCACATTTCTGAGAATCAAGAAACAAGTCAAACAGAAGTAAATCAAAAAGAGAGACTAATTGATTACAAGGAACAGCAAAGCAGCAATAATGAAACATCTCATATGGAGGAAGAATTTGCAAATCCACTTTGTTCAGTGTGCAAGAATAGGAGACCAAAAATTGGATGCAAGATAGACTTGAGTTATGCAGAGCTCTACACTGCTACCCAGGGATTTTCTGCTAAGAACTTTCTGTCAGAAGGTGGGTTTGGATCTGTCTACAAAGGACAGCTAAATGGAATGACAGTTGCTGTTAAGCAACATAAAAGTGCAAGCTTCCAAGGAGAGAAGGAATTCAAGTCTGAAGTCAATGTACTTAGCAAAGCAAGACATGAGAATGTGGTCATGCTACTAGGTTCATGCGCAGAAGGAAATAATAGGCTTCTTGTTTATGAATATGTCTGCAATGGATCACTTGACCAACATCTCTCAGTACACTCTCGGTCACCTCTTACTTGGAAAGATAGGATGAACATAGCTCTTGGAGCAGCCAAAGGCTTACTATACTTACACAAAAATAACATAATACACAGAGACGTGAGACCAAACAATATCCTTATAACACATGATCATCAACCAATGCTGGGAGACTTTGGATTAGCACGAAATCAAAATCAAGACTCAATACACTCAACCGAAGTTGTTGGAGCTTTGGGGTATTTGGCACCAGAGTATGCAGAACATGGCAAAGTGTCAACTAAAACAGATGTATATTCTTTTGGGGTGGTTCTACTACAGCTTATAACTGGAATGAGAACTACAGACAAAAGACTCGGAGGAAGAAGTCTTGTGGGATGGTTATTACAGGCAAGGCCACTTTTAAGAGATAGGAATTATCCAGATTTAATTGATGAAAGGATCATTAACTCTTATGATTACCATCAACTGTTTTGGATGGTACGAATAGCAGAAAAATGTCTAAGCAGGGACCCTAAGAAGAGACTAAATATGGTTGCGGTAGTTAATGCTTTAACTGACATTGTGGAAGGCAACACGTGTGACATTGGAATGAGAGATTACTCCCCTGCAAGGTCAGATTCATCCTATAGTGGATCAGATTTTGATGAATCTGAAGATGAAATGTTGGGACGCTTTGAGATTGAAGGTGAGTTACAAAGTCACAGTTCAGAATCCCCAACATGTAATAGCATAAGTCAGATTATTGTAAGACAGCCACCATCCCCTCCAATTCAGAGCATCTCTTCAAGTGGCTCAAGTTCATTTAAGTTCTATGATGAATCAAATAGTAATTGTGAAGCACATGATGAAGGGAATACAGAAATGTCAAAATCAAATGTGGGGTTACTCAATTCTTAG 2103 0.3913 MSTEPQTVVVIQDASRDVSLKAMERALKKLSVKAGDQLIIVAILDWFSSPSTFSFFGRKPLGYSVSVDSSSFVATNKKIIDENHNRKKKAYSKNRYINELSEYCKMNKIEFQTEVLIGPAAQVISEAARKFRATSLILDRQMHKDKKYFMHRIRCGMYRITSDNSIEKLKDPNSTATKLAERQENVSYGEMIPGSTEEAVSIQMSRSSSSDLFTLTGVSSQWSTEASTSSIGGSSQYVEQETKENRSLFHISENQETSQTEVNQKERLIDYKEQQSSNNETSHMEEEFANPLCSVCKNRRPKIGCKIDLSYAELYTATQGFSAKNFLSEGGFGSVYKGQLNGMTVAVKQHKSASFQGEKEFKSEVNVLSKARHENVVMLLGSCAEGNNRLLVYEYVCNGSLDQHLSVHSRSPLTWKDRMNIALGAAKGLLYLHKNNIIHRDVRPNNILITHDHQPMLGDFGLARNQNQDSIHSTEVVGALGYLAPEYAEHGKVSTKTDVYSFGVVLLQLITGMRTTDKRLGGRSLVGWLLQARPLLRDRNYPDLIDERIINSYDYHQLFWMVRIAEKCLSRDPKKRLNMVAVVNALTDIVEGNTCDIGMRDYSPARSDSSYSGSDFDESEDEMLGRFEIEGELQSHSSESPTCNSISQIIVRQPPSPPIQSISSSGSSSFKFYDESNSNCEAHDEGNTEMSKSNVGLLNS. 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07759 700 SUPERFAMILY Protein kinase-like (PK-like) 310 600 IPR011009 -
Seca3g07759 700 ProSiteProfiles Protein kinase domain profile. 321 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g07759 700 MobiDBLite consensus disorder prediction 653 676 - -
Seca3g07759 700 Gene3D Phosphorylase Kinase; domain 1 276 395 - -
Seca3g07759 700 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 396 601 - -
Seca3g07759 700 ProSitePatterns Tyrosine protein kinases specific active-site signature. 437 449 IPR008266 GO:0004672|GO:0006468
Seca3g07759 700 Gene3D Transferase(Phosphotransferase) domain 1 396 601 - -
Seca3g07759 700 Pfam Protein tyrosine and serine/threonine kinase 324 584 IPR001245 GO:0004672|GO:0006468
Seca3g07759 700 SMART tyrkin_6 321 586 IPR020635 GO:0004713|GO:0006468
Seca3g07759 700 Gene3D HUPs 1 153 IPR014729 -
Seca3g07759 700 PANTHER OS01G0253100 PROTEIN 210 590 - -
Seca3g07759 700 MobiDBLite consensus disorder prediction 653 700 - -
Seca3g07759 700 FunFam Proline-rich receptor-like protein kinase PERK8 283 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07759 Seca-Chr3 193131030 193137860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07759 309 597 Trihelix Transcription Factor Family AT1G70460 46.333 3.39e-75 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Seca3g07759 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07759 - - gsj:114417376 946.421