Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07741 ATGACTACTTGTGATAATAGTCTTAAAAGTGCTCTTAATATAGACCACCACGATTCTGGATTGTCATTAGAGCCTTCCTTAGAGCCTTATAAAGGAATGAAATTTACATCAATTGAAGATGCAAAGAATCACTATACAAGGTATGCAAAGAACAAAGGTTTTAGCTTTCGCATGGGTCGTATTACTAAATCAAGAACAAATGGTATGATGATTGGTCAAGAGTTCCTTTGTTCAAAGGAAGAGTTTCGAAAAAAAATGGAGAAAGGGTAG 270 0.3481 MTTCDNSLKSALNIDHHDSGLSLEPSLEPYKGMKFTSIEDAKNHYTRYAKNKGFSFRMGRITKSRTNGMMIGQEFLCSKEEFRKKMEKG. 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07741 89 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 85 - -
Seca3g07741 89 Pfam FAR1 DNA-binding domain 44 87 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07741 Seca-Chr3 192261903 192262172 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g07741 FAR1 3.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07741 - - psat:127129645 114.005