Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07731 ATGGGGTCTCAAGGTTGTAGTGTTAATAATGGAAAACATTCACAACTCCAGCCTTTGGTGCGGCAAAACTCAATGTACAGTCTTACACTTGATGAAGTTCAGAGTCAGTTAGGTGACTTGGGAAAGCCACTAAGTAGTATGAACCTTGATGAGCTTCTGAAAAATGTATGGACTGCCGAGGCAAACCAATCCATTGGTATGGAAACTGAGGACACACCTCAAGCCGGTCAAGCTAGTGTGTCATTAACCGGTGCACTAAGCAAGAAGACAGTTGATGAAGTTTGGAGAGATATCCAACAGAGCAAAGATAATAAGGAGAAGAAGACTCAAGAGAGACAGCCTACTCTGGGAGAGATGACATTGGAGGATTTCCTGGTGAAAGCAGGGATTGTTGCTGAATCATCTTCTGATAATAGAAACAACACTGGTCCTACAGTTGGTGTTAATTCAAATGTAGCAGCACGGCAGTTTCCTCCACATGGTCCGTGGATACAGTATCCACAACCACAATATCAGCATCCACAACAAAATTTAATGGGGGTTTATGTGCCTAGCCAGAATATAGCACAGCCATTACACATTGGGGCTGGTGCTCCATTGGATGTTCCATTTGCAGATGGTCAGGTGGCAGCATTGCCTTCACCTGTGATGGGAACCTTGTCAGATACAAAGAAAAATGGGAGAAAACGGGGCACATCAGAGGACATGGTAGAGAAGACTGTTGAGAGGAGACAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTACACAACTGAATTAGAGCAAAAAGTCTCACGTCTGGAGGAGGAAAATGAAAGGCTGAGGAAACAGAAGAAGCTAGAGAACATCTTATCCAGTGTTCCACCACCAGAACCTAGATATCAGATTAGCCGTACATCATCAGCTCCATTCTAA 942 0.4448 MGSQGCSVNNGKHSQLQPLVRQNSMYSLTLDEVQSQLGDLGKPLSSMNLDELLKNVWTAEANQSIGMETEDTPQAGQASVSLTGALSKKTVDEVWRDIQQSKDNKEKKTQERQPTLGEMTLEDFLVKAGIVAESSSDNRNNTGPTVGVNSNVAARQFPPHGPWIQYPQPQYQHPQQNLMGVYVPSQNIAQPLHIGAGAPLDVPFADGQVAALPSPVMGTLSDTKKNGRKRGTSEDMVEKTVERRQKRMIKNRESAARSRARKQAYTTELEQKVSRLEEENERLRKQKKLENILSSVPPPEPRYQISRTSSAPF. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07731 313 Pfam bZIP transcription factor 243 286 IPR004827 GO:0003700|GO:0006355
Seca3g07731 313 Gene3D - 241 295 - -
Seca3g07731 313 SMART brlzneu 239 295 IPR004827 GO:0003700|GO:0006355
Seca3g07731 313 MobiDBLite consensus disorder prediction 215 269 - -
Seca3g07731 313 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 246 261 IPR004827 GO:0003700|GO:0006355
Seca3g07731 313 SUPERFAMILY Leucine zipper domain 243 288 IPR046347 GO:0003700|GO:0006355
Seca3g07731 313 CDD bZIP_plant_BZIP46 243 289 - -
Seca3g07731 313 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 312 IPR043452 GO:0003700|GO:0045893
Seca3g07731 313 Coils Coil 259 293 - -
Seca3g07731 313 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 241 293 - -
Seca3g07731 313 MobiDBLite consensus disorder prediction 287 313 - -
Seca3g07731 313 MobiDBLite consensus disorder prediction 223 269 - -
Seca3g07731 313 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 241 286 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07731 Seca-Chr3 191904277 191911002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07731 17 313 bZIP Transcription Factor Family AT3G56850 54.723 1.13e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca3g07731 bZIP_1 2.8e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07731 K14432 - gmx:100784924 468.774