Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07716 ATGGCCGAGGTGATCAACATGCCGCCCGAATCTCTCGACCGATCCCCCTCCGCCCCCGCTCCTCCGGCTCCTCCTGCCTCCGCCACCACTGCCGATGACGATCTCCCGCCGCCACCTCTCCCTCGACGGAGGGACCGCCGGGACGACAGGGATTTCGACCGCCACCCCAACCGCAGCAACCGCGATTACTATGACCGCGACAGGGACTTTAAGCGCCGTCGCAGCCCTAGCCCTGGCTACCGCGACCGCCGCCACTCTCCTCCTCCACCCTCACGACGTTCGCCTCCGCCGTATAAGCGATCCAGAAGGGGCAGCCCCCGCGGCGGCGGTTATGGACCCGATGATAGCAGATTTGGCTATGATTACTTTGGTGGCTATGAACGGGGAGTGGGTGGAAAGGCTGGTTACGCAGATGAGAAATCTTATGGCAGGTTTTCACATCGATCTGCTGGGGGATATCAAAATGGAATTTCTGATGTGGATACCAATCGTGGTTATGCAGATCTGCCAAGTGGAGGTGCACAAAGAGAGGGGTTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAAGATGATGTACTGCCATCTGAAGCTGAGCGTAGGTATCAAGAGTACAAATCAGAGTATATTTCTACACAAAAACGAGCTTATTTCAATGCTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTACTTACAGTAATTGAAAGGAGGAATGAAAATGCTCGACGAATGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACACTAGACCTAAATCCTAGTTTAAACTCCTCATCATCCAGTAAATCAGGGCAAGCCAGTGAGCCAAATTCAGAGGAGGAAACAGATGCTGGTGGCAAAAGAAGAAGACATGGTAGGGGATCTAATAAAGATAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTATCAGTTCTGAACCTAGACGGATACAAGCCGATATTCAACAGGCTCAGGCTGTTGTTCGTAAACTTGACATGGAAAAGGGGATTGAAGATAATATTTTATGCAGCAGTGATCACAATAAAAATGATGATAAGTCTCACAGTGGATCTGCGGGCCCCATAATCATTATACGGGGCCTAACATCTGTTAAGGGCTTAGAGGGTGTTGAGCTACTGGACACACTTATTACATATCTTTGGCGGATTCATGGTATAGATTATTATGGAATGGTTGAGACTAATGAGGCTAAGGGTTTTAGGCATGTGAGACCAGAAGGAGCGGGGCATGAAGAAACAAGTAAATCAGGGTCAGAATGGGAGAAGAAACTTGATTCATTTTGGCAAGGAAGGTTGAATGGTCAAGATCCCTTGGAAGTAATGACTGCTAAGGAGAAGATAGATGCTGCGGCAGCTGATGTGCTGGATCCACATGTCAGAAAAATTAGGGATGAAAAGTATGGTTGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCAGCTGAGTTTGTGCATAAACATCTGAAGCTAAAACACCCAGAGCTTGTAATGGAACTGACATCAAAATTGCGTGAAGATCTTTATTTTCAGAATTACATGAATGATCCTGATGCTCCGGGTGGAACGCCTGTCATGCAGCAACCTCAGAAGGACAGGTCTATAAAGCGAAGATTAGGGTTGGAGGGCCGATTGAAAGATGATCGTGGTATCCGGCGAGACAATGATAGGAGTGACAGAATAAATGGAGATAGGCCTGACAATTCCCCATCTCGTGAAAGGCAGATGGGAAACCATGATGACACAATGTATGATGCATATGGAGGGCCTGGTGTACCTCCATTTACCTCAGATATGCCCCCTCCTCCACCAGTTTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTAAGGGAGCAAGGAGGACCATCTTCATATGATCCATCCGGAAGGAAGATGCGATCTGCTCCTCACATGGGTGGACCGGCGCCAATAATTGCCGTTCCTCCATCCTTTAGACCTGATCCTCGACGGATGCGAAGTTATCAAGATTTGGATGCCCCAGAAGACGAAGTTACTGTGATAGACTATCGGAGCTTGTAG 2133 0.4805 MAEVINMPPESLDRSPSAPAPPAPPASATTADDDLPPPPLPRRRDRRDDRDFDRHPNRSNRDYYDRDRDFKRRRSPSPGYRDRRHSPPPPSRRSPPPYKRSRRGSPRGGGYGPDDSRFGYDYFGGYERGVGGKAGYADEKSYGRFSHRSAGGYQNGISDVDTNRGYADLPSGGAQREGLMSYKQFIQELEDDVLPSEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARRMAKDFLLDLQSGTLDLNPSLNSSSSSKSGQASEPNSEEETDAGGKRRRHGRGSNKDNDFSAAPKAHPISSEPRRIQADIQQAQAVVRKLDMEKGIEDNILCSSDHNKNDDKSHSGSAGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGIDYYGMVETNEAKGFRHVRPEGAGHEETSKSGSEWEKKLDSFWQGRLNGQDPLEVMTAKEKIDAAAADVLDPHVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVMELTSKLREDLYFQNYMNDPDAPGGTPVMQQPQKDRSIKRRLGLEGRLKDDRGIRRDNDRSDRINGDRPDNSPSRERQMGNHDDTMYDAYGGPGVPPFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSSYDPSGRKMRSAPHMGGPAPIIAVPPSFRPDPRRMRSYQDLDAPEDEVTVIDYRSL. 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07716 710 Pfam Arsenite-resistance protein 2 426 609 IPR007042 -
Seca3g07716 710 MobiDBLite consensus disorder prediction 14 36 - -
Seca3g07716 710 MobiDBLite consensus disorder prediction 287 304 - -
Seca3g07716 710 ProSitePatterns Zinc finger C2H2 type domain signature. 487 510 IPR013087 -
Seca3g07716 710 MobiDBLite consensus disorder prediction 548 597 - -
Seca3g07716 710 MobiDBLite consensus disorder prediction 265 286 - -
Seca3g07716 710 PANTHER ARSENITE-RESISTANCE PROTEIN 2 42 708 IPR039727 GO:0006397
Seca3g07716 710 Pfam SERRATE/Ars2, N-terminal domain 183 268 IPR021933 -
Seca3g07716 710 MobiDBLite consensus disorder prediction 529 603 - -
Seca3g07716 710 MobiDBLite consensus disorder prediction 265 324 - -
Seca3g07716 710 MobiDBLite consensus disorder prediction 649 697 - -
Seca3g07716 710 MobiDBLite consensus disorder prediction 37 76 - -
Seca3g07716 710 MobiDBLite consensus disorder prediction 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07716 Seca-Chr3 191537702 191551824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07716 80 710 C2H2 Transcription Factor Family AT2G27100 65.284 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07716 K27103 - gmx:100817569 1118.99