Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07687 ATGTCTCTTGAATTTGATTCAGAGGAAGATGCTTTTAATTTTTATAGTAATTATGCTAAAGTAGTTGGGTTTTCAGTAAGAAAAGATTACGTCTATCATGATGATTGGTATGGGATTGTTATGAGAAACATGGTATGTAATAGGCAAGGAGAGAGGTCTGAGAAGAACATGCAAAGGAAGGACATGTGTCGTGAACCAAGGGCCATTACACGCACACGTTGCCAAGCAAGGCTCCGTGTTCGTTTAGGTTACATGAGTGGAAAATGGACAGTTACTCATTTTGAGCCCAACCATAATCACGAGTTGATCCCATCAACATATGTCCATTTGATTCCTGCATATAGAGGTCTTTCTGAAGGTGATAAGGCTCAAGTGAATAGTTTGCACATGTATGGTGTTCGTACTTGTCATATTTTGTGTTTCATATTAGGTCAGAAAGGGGGGTATGCAGATCTATGCTTTTGCAAAAAGTATTTGTACAACCATATAGATAAGGACAAAAGGGCTAAAGTAAAGGATGGTGATGCTTTTGTCGCCTTATGTTACCTTCAGGCAAAAGCTGATAATGACCCAAAGGCGGATAAAGAATATAGACACAATGAGTTGATGTCTGATTTCAAGACTAAGTTTTCTGATCTATTTCTGAGTACATCTTTGTATAAGTATGAAATTGCTGCATCCAAATTTCATACAAGGAACGAGTTTTGGGACGATAGAAAAGAGATTGAAAATGTTGCCGCTCTCAATGTCATTGATAGATCGGAAGTTGATAACAAAGTGAGGTTGAAGATAAACAAATTTGGAAGTGCTTGTTCTGAGTATGTGGTGATATATGACAAAGATAAAGGGGTTTTTGCTTGTGACTCTCATCTATTTGAGTCTTGTGGAATTCCATGCTCTCACATCTTTTGTACAATGAAAAATGAGAAAATAAAGGTAATACCTGAATCTTTGATATGCAAGAGATGGACGAAGGCAGCCAAGGATGAATTTATTTCTGAAATAAGTGTTGAAGACAATCATTCTAGTAAGTTGGATCTATTGAGGACTGGAGCTATTGCAGATGCATGTAATAGGCTTTTTAGAGTTACTTGTAAGTATCTGGGAAATTATCCTGTAAATATTGATTCAATTAACAAGTTGACTGCTGAGATTGAAAAAAGAGGAAGTTCAGATAAGAACCGCAACAAAGGATCCAATGTGATTGGTGACCGTATAGTGGTTAAAACTAAAGGTACTCCACGAAAAGGGAAAAATAGGACGAAAAGCAGAAATTGCTCGCATTGTAAGAGGATTGGTCATCATGTTTGTAAGTGTCCTTCTTTGAGAGATCGTGATAAGCTGGGAGAGGTTCAAGTTGACAGCATGGCAAACGCTACAGAAGATGAAAGAAATGATGATGTGGTTAGTGTTATTATGTTTTAA 1425 0.3712 MSLEFDSEEDAFNFYSNYAKVVGFSVRKDYVYHDDWYGIVMRNMVCNRQGERSEKNMQRKDMCREPRAITRTRCQARLRVRLGYMSGKWTVTHFEPNHNHELIPSTYVHLIPAYRGLSEGDKAQVNSLHMYGVRTCHILCFILGQKGGYADLCFCKKYLYNHIDKDKRAKVKDGDAFVALCYLQAKADNDPKADKEYRHNELMSDFKTKFSDLFLSTSLYKYEIAASKFHTRNEFWDDRKEIENVAALNVIDRSEVDNKVRLKINKFGSACSEYVVIYDKDKGVFACDSHLFESCGIPCSHIFCTMKNEKIKVIPESLICKRWTKAAKDEFISEISVEDNHSSKLDLLRTGAIADACNRLFRVTCKYLGNYPVNIDSINKLTAEIEKRGSSDKNRNKGSNVIGDRIVVKTKGTPRKGKNRTKSRNCSHCKRIGHHVCKCPSLRDRDKLGEVQVDSMANATEDERNDDVVSVIMF. 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07687 474 PANTHER OS01G0519700 PROTEIN 195 341 - -
Seca3g07687 474 Pfam FAR1 DNA-binding domain 13 103 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07687 Seca-Chr3 190092304 190094408 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g07687 FAR1 9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07687 - - aip:107640898 241.121