Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07640 ATGGTGTCAGGAGGGATTGGATGGGTTATGTCATTAGTAGATGTTCTGTACAGCTCAGAAGAAGTAAAAACTTGTGTTCAGTTCTTCCTAGATATGGGTTTAGATGAGAAGGATTTTGGCACAATGGTTTTTGATTTTCCTAGAGTACTTGGTTACTATACTCTGGAAGAAATGAACCAAAAGGTTAATTATTTAAAAGAATTTGGGCTTCAAAGTAAGGATGTTGGCAAATTGCTGGCATTTAGGCCACAGTTGATGGCGTGCAGCATTGATGAACAATGGAAACCTCTTGTTAAGTATCTGTACTATTATGGGATCGACCGAGATGGTATGAGGAGAATGCTTACCCTTAAACCAATGGTCTTTTGTGCTGACTTGCAGATGACTATTGTGCCAAAGGTATGCAAACGCTGGTTTTGTTCGTTTCTTTTATCAGTTGAGTGA 444 0.3896 MVSGGIGWVMSLVDVLYSSEEVKTCVQFFLDMGLDEKDFGTMVFDFPRVLGYYTLEEMNQKVNYLKEFGLQSKDVGKLLAFRPQLMACSIDEQWKPLVKYLYYYGIDRDGMRRMLTLKPMVFCADLQMTIVPKVCKRWFCSFLLSVE. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07640 147 Gene3D Transcription termination factor 3, mitochondrial 11 141 IPR038538 -
Seca3g07640 147 PANTHER CGI-12 PROTEIN-RELATED 74 143 IPR003690 GO:0003690|GO:0006355
Seca3g07640 147 SMART mt_12 112 145 IPR003690 GO:0003690|GO:0006355
Seca3g07640 147 SMART mt_12 40 71 IPR003690 GO:0003690|GO:0006355
Seca3g07640 147 SMART mt_12 76 107 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Seca3g07640 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07640 K15032 - gmx:100813633 213.001