Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07639 ATGGTCCAGACCTTGCAGGATCTCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGATGGTCGAATTATCCCAAGACTCAAAGTTCTGGTGGAGAATCAGATTAATGTTAAGCTGAGATACATGTTGGCTAGCACTGATGAAGAATTTAACAAAATGATGAAGGCTCTAATTAGAAAACGCCAGAGATTTCAATCTGCAGTCATGAAGGAGGATACTAGTAATCCCGAATCTGTTATTACTGAGGATATTACTACACCCGAGACATAA 270 0.3889 MVQTLQDLIEFPRFFSYSLDGRIIPRLKVLVENQINVKLRYMLASTDEEFNKMMKALIRKRQRFQSAVMKEDTSNPESVITEDITTPET. 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07639 89 MobiDBLite consensus disorder prediction 68 89 - -
Seca3g07639 89 Pfam mTERF 1 50 IPR003690 GO:0003690|GO:0006355
Seca3g07639 89 Gene3D Transcription termination factor 3, mitochondrial 1 65 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07639 Seca-Chr3 188052719 188053109 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Seca3g07639 mTERF 7.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07639 K15032 - csav:115712037 115.161