Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07614 ATGTCTCTGTTTGCAAGAAATGTTCCCCTGTTGTGGGTGCTTTTACTGCTATCAACTAGCAGCGCTCTTGGATCAAGTGTACTAACAACGCATGTGAAGGTCACAAATATTTTGGGTGTGTTGGATTTGAACCTTCACTGTAGATCTGGGAATGAGGATCTTGGATTGCGAATTCTCCATCCTGGTGGTTACTTTGAATGGAGTTTTGATCAGTCAGGGCAGCCGTTCAAAATATACACATGTTCCTTTCAATGGCGAGGTGCCTCTCACTTGTTTGATATATACAAAGCAGGTAGGGATTCTGTTTGTCAATCATGTATTTGGTATATTAAGCAGGATGGACCATGTAGGTATATACCTCTTTTTCATAAATATGTTTGCTATGCCTGGAAAGCCTAA 399 0.4085 MSLFARNVPLLWVLLLLSTSSALGSSVLTTHVKVTNILGVLDLNLHCRSGNEDLGLRILHPGGYFEWSFDQSGQPFKIYTCSFQWRGASHLFDIYKAGRDSVCQSCIWYIKQDGPCRYIPLFHKYVCYAWKA. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07614 132 PANTHER - 29 118 IPR010264 -
Seca3g07614 132 Pfam Plant self-incompatibility protein S1 31 130 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07614 Seca-Chr3 186636643 186637041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07614 29 132 Carbohydrate Esterase AT3G16970 35.455 2.66e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07614 - - pvu:PHAVU_011G171500g 98.9821