Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07608 ATGGAAGCCAAGACTTTTGCAAGCCGAATTTCCCACCAGGTAATTCTCACAATTGTTATCTTCATCCTTCTAGCTATATCTAGCACAAGTTCAGCAATATGCAATAATTCTACCATCCCTACCACCAATTCAACAAATACCAACTTCATAAACACTCCCATTCCTTCCAATTCCACCCAAACCAATATTTATGAAAACACCACCATTCCTTCCAATTCCACCCAAACCTTCAGAACCTACATTAAAACCTCTTGCAATTCAACCACATACCCATCAATATGCTACCAATCATTATACCCCTATGCTTTCAAAATTGAAGCAAATCCAATGAAGCTCTGCAATGTCTCTCTCTCCCTGGCCTTAAAGGCAGCTCAGAGTGCATCATCCACCATAACAGAGCTTCTGAAGAGCAATAATAATTTGACAGGCAAAGCAGAACAAGTTGTACAAGATTGCTTTGGCAATGTCAAGGACTCAATAGAACAATTACAGGACTCTCTTGATGCTATGGGACATTTGGATGATATTGATAGAGAGTTTCAGATTAGCAATGTGAAGACTTGGGTCAGTGCTGCTATCACCAATGATCAAACGTGCTATGATGAATTTGATGAGATGGGAGTGGATGCCAGCGTGAGGGACAGAATCAGAAAGAGTGTTTTGAATGTGGCAAGGACGACTAGTAATGCTTTGTATTTCATCAACAGTAACATATACTAA 720 0.3986 MEAKTFASRISHQVILTIVIFILLAISSTSSAICNNSTIPTTNSTNTNFINTPIPSNSTQTNIYENTTIPSNSTQTFRTYIKTSCNSTTYPSICYQSLYPYAFKIEANPMKLCNVSLSLALKAAQSASSTITELLKSNNNLTGKAEQVVQDCFGNVKDSIEQLQDSLDAMGHLDDIDREFQISNVKTWVSAAITNDQTCYDEFDEMGVDASVRDRIRKSVLNVARTTSNALYFINSNIY. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07608 239 CDD PMEI-like_3 83 235 - -
Seca3g07608 239 SMART PMEI_2 76 233 IPR006501 GO:0004857
Seca3g07608 239 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 236 IPR035513 -
Seca3g07608 239 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 232 - -
Seca3g07608 239 FunFam Pectinesterase 78 238 - -
Seca3g07608 239 Pfam Plant invertase/pectin methylesterase inhibitor 80 231 IPR006501 GO:0004857
Seca3g07608 239 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 80 235 IPR035513 -
Seca3g07608 239 NCBIfam pectinesterase inhibitor domain 71 235 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07608 Seca-Chr3 186247449 186248168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07608 81 235 Carbohydrate Esterase AT3G14310 27.848 1.29e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07608 - - gmx:100527443 279.256