Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07602 ATGGCAAAGGGTTCCCTTTTTTTCCTTCTTCTCTCTGTTCTGTGTATTGCAGGAATAGCAGCAGTTCCTACAAATTTCATCAAGTCCTCTTGCAGTACCACTCAATACCCAGCACTCTGTGTTGAATCCCTCTCTGTCTATGCAGCTACCATCCAACAAGACCCTCATCAATTGGTACAAACAGCCTTGTCACTCAGCCTCAACAGGACTGAGTCCACCAAGGCATTTGTGACAAATTGCAAGAAATTCAGGGGTCTTAAGGCCAGAGAGTATGCTGCTCTTCATGATTGTGCTGAAGAAATCAGTGACAGTGTGGACAGGCTTAGCCGTTCACTCAAGGAGCTGAAGATGTGCAAGGTCAAGGGTGAGGATTTCACATGGCACATAAGCAATGTTGAGACATGGGTCAGCTCTGCTTTGACTGATGAAAGCACTTGCAGTGATGGGTTTGCTGGAAAGGCACTTAATGGAAAAATCAAGGCTTCTATTAGAGCTAGAATGGTGAATGTTGCTCAGGTCACTAGTAATGCTCTTTCACTCATCAACCAGTATGCTGCAAATCACTAG 567 0.4497 MAKGSLFFLLLSVLCIAGIAAVPTNFIKSSCSTTQYPALCVESLSVYAATIQQDPHQLVQTALSLSLNRTESTKAFVTNCKKFRGLKAREYAALHDCAEEISDSVDRLSRSLKELKMCKVKGEDFTWHISNVETWVSSALTDESTCSDGFAGKALNGKIKASIRARMVNVAQVTSNALSLINQYAANH. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07602 188 CDD PMEI-like_3 29 186 - -
Seca3g07602 188 NCBIfam pectinesterase inhibitor domain 6 184 IPR006501 GO:0004857
Seca3g07602 188 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 180 - -
Seca3g07602 188 SMART PMEI_2 22 180 IPR006501 GO:0004857
Seca3g07602 188 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 184 IPR035513 -
Seca3g07602 188 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 184 IPR035513 -
Seca3g07602 188 FunFam Pectin methylesterase inhibitor 1 22 184 - -
Seca3g07602 188 Pfam Plant invertase/pectin methylesterase inhibitor 25 180 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07602 Seca-Chr3 186064227 186064793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07602 27 181 Carbohydrate Esterase AT3G14310 29.487 3.82e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07602 - - gmx:100305900 312.768