Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07537 ATGGGAACTCCTCTCTCCGACGCCAAGCCCCTAACTCCCTCACCACTACTCAAACCTAAATCTATTTTCTTACATCAATGGTGGCTTGTGAAGCCTCAACAGCAACGCGAGGGTTTAGCTGTTGGTGGCGTTACTTTCATGGAGAGGGAGAGAGTGTTTTTCTCTACAGTGATTGCAAAGAGGCTTGAGGCTAATGTCTTAGAGACTGAAGATGGCATCACAGTTAGTTTCCGTGGTTTCATTAACACCTCTCGTACATGTGAAAATGGCTTCCCATCTGTGGTACTCTATAATCTTTCAATGAATTTTGCTTATACCATTGTGTGTGTGTGA 333 0.4414 MGTPLSDAKPLTPSPLLKPKSIFLHQWWLVKPQQQREGLAVGGVTFMERERVFFSTVIAKRLEANVLETEDGITVSFRGFINTSRTCENGFPSVVLYNLSMNFAYTIVCV. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07537 110 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 18 100 - -
Seca3g07537 110 Pfam SANTA (SANT Associated) 22 103 IPR015216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07537 Seca-Chr3 184147437 184148876 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca3g07537 SANTA 4.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07537 - - lja:Lj3g3v1932910.1 138.658