Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07513 ATGGAATCCCAATTAGATGATGGAAATGGCGGGATGGAAGTTTCCGGGGATGTTGGTTTGGGTACATATGAAGTTCAGATACATCAAGAAACATATGAAGTGGATCCAAATGAGGGGTGTAGAGTGCTAGAGAGCTCTTCCGGGGGAGAATTGGGTACTTCTGATGACCATGCTATTCAGGAACCATTTGAAGGCATGGAATTTGAATCTGAAGATGCCGCTAAGATATTCTATGATGAATATGCCCGACATGTAGGATTTGTCATGCGTGTGATGTCTTGTCGACGCTCAGAAAGAGATGGTAGGATTCTTGCCCGTAGGCTGGGATGTAATAAGGAGGGTTATTGTGTCAGCATCCGGGGGAAATTTGGGTCAATTCGTAAACCAAGGGCCAGCACAAGGGAAGGTTGTAAGGCAATGATTCATATCAAATGTGATAAGTCTGGAAAATGGGTGATAACAAAGTTTGTGAAGGATCATAATCATCCACTAGTAGTCTCTCCACGTGAAGCACGTCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACATCAGAGCTTCGGAATAAAAAACGGTTGTGTGCAACATATCAAGAACAGTTGACTTCTTTTATTAAAATTGTTGAAGAGCACCGGGACAAGCTGTCTGTGAAAATTCATAACATAGTTAATAATCTTAAAGAATTTGAATCCATAGAAGAGCTTTTGCACCAGACATAG 726 0.4105 MESQLDDGNGGMEVSGDVGLGTYEVQIHQETYEVDPNEGCRVLESSSGGELGTSDDHAIQEPFEGMEFESEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGSIRKPRASTREGCKAMIHIKCDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTSELRNKKRLCATYQEQLTSFIKIVEEHRDKLSVKIHNIVNNLKEFESIEELLHQT. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07513 241 Pfam FAR1 DNA-binding domain 77 165 IPR004330 -
Seca3g07513 241 Coils Coil 175 202 - -
Seca3g07513 241 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07513 Seca-Chr3 183582023 183587590 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g07513 FAR1 3.7e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07513 - - gmx:100793266 432.18