Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07497 ATGGCTTATAAACCAGGGCTGCATGAGCAATTTAAAGCAGCTTGCTTTTCTTCTACCTTTCTCCTATATCTTTTTTGCTTTCTTGTTATTATCATTGTTGTGTTGAACCTAACAAGAAGAGCCAAGATCAAACCCAAATTGAATATGCCTCCATTTCCAACAAAATTACCAATCATTGGCAATATTCATCAGCTAGGCACATTGCCATATCAGACTTTTAGAGCCCTTTCACACAAGCATGGTGCTCTAATGATGTTGCAGTTGGGGAAGACTCAAGCTTTGGTTGTTTCATCTGCTGATGTGACCATGGAAATTATGAAAACTCATGACATAGCCTTCTCCAACCGAGCACAAAACACAGCTACAAGAATCTTACTGTATGGATGCAATGACATTGGTTTTGCACCCTATGGAGAAAGTTGGAAACAGAAAAGAAAAATATGTGTGGTTGAACTTTTGAGCCCCAAAAGGGTGCAATCATTTAGTCTCACCAGAGATGAAGAAGTTGCAAAATTGGTTAGCAAGATACGTGAAGCAAGCTTGAGTGGTGCATGCTCTGTCAATCTAAGTGAGTTGCTTATTGAATTTGCAAACAATGTCATTTGTAAATGTGCTCTTGGACAAAAGTACAACTTGGAAGATTGTTACAACAGGGTCAAAGAGGAAGCAAGGAAGGTGATGACCCAAATTGCAATTGTCACTATGGGAGATCTCTTTCCTCTATTAGGTTGGATTGATCTTTTCACTGGCCAAATTCAAGAAATCAAGGCCACTTTTGAAGCATTGGATGCTTTATTTGATCAAGTAATTGTGGAGCATAAGAGGATGAAGAAGGAAGGTGAACACCCCTCCCATGAGAAAGACTTTGTGGATATCCTCATCCAACTTCAGGAGGATGGCATGCCTGACTCTGAGCTCACCAACAATGATATCAAATCAATGTTAATGGACATGTTTGCAGCAGGAAGTGGTACAGTTTCGGTAACATTAGAATGGGCTATTGCAGAGCTAGTGAAAAATCCAATGACTTTGAAGAAAGCACAGGAAGAGGTGAGAAGATGTGTGGAGCACAAATCAAAAGTAGAAGAAAATGATGTCAACCAAATGGACTACATCAAATGTGTTGTCAAAGAAACTCTAAGGTTACATCCACCTGCTCCTCTGTTGGCTCCTAGAGAGACATCATCAAATGTGAAACTCAGAGGGTATGATATTCCAGCAAACACAACAATATATGTGAATGCATGGGCAATCCAGAGGGACCCTGAATTTTGGGAAAGGCCAGAAGAGTTCATTCCAGAGAGACATGTTAATAGTGAGGTTCAATTTAAAGGTCAAGATTTCCAATTTATTCCATTTGGTTTTGGGAGAAGGGGATGCCCTGGAATGACCTTTGGGCTTGTTTCTGTTGAATATGCACTAGCCAATCTTCTTTATTGGTTCAATTGGAAACTGCCTGCAACTGTTCAAGACATTGACATGAGTGAGGCATATGGGCTCCTTGCCACAAAAAAAGTGCCACTATGTCTAAAACCAATTCCATTTTCATATGAGTCCAACTTCTAA 1566 0.4004 MAYKPGLHEQFKAACFSSTFLLYLFCFLVIIIVVLNLTRRAKIKPKLNMPPFPTKLPIIGNIHQLGTLPYQTFRALSHKHGALMMLQLGKTQALVVSSADVTMEIMKTHDIAFSNRAQNTATRILLYGCNDIGFAPYGESWKQKRKICVVELLSPKRVQSFSLTRDEEVAKLVSKIREASLSGACSVNLSELLIEFANNVICKCALGQKYNLEDCYNRVKEEARKVMTQIAIVTMGDLFPLLGWIDLFTGQIQEIKATFEALDALFDQVIVEHKRMKKEGEHPSHEKDFVDILIQLQEDGMPDSELTNNDIKSMLMDMFAAGSGTVSVTLEWAIAELVKNPMTLKKAQEEVRRCVEHKSKVEENDVNQMDYIKCVVKETLRLHPPAPLLAPRETSSNVKLRGYDIPANTTIYVNAWAIQRDPEFWERPEEFIPERHVNSEVQFKGQDFQFIPFGFGRRGCPGMTFGLVSVEYALANLLYWFNWKLPATVQDIDMSEAYGLLATKKVPLCLKPIPFSYESNF. 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07497 521 Gene3D Cytochrome P450 35 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 FunFam Cytochrome P450 83B1 37 511 - -
Seca3g07497 521 Pfam Cytochrome P450 50 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 CDD CYP71-like 79 508 - -
Seca3g07497 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Seca3g07497 521 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07497 521 PANTHER CYTOCHROME P450 71B11-RELATED 29 513 - -
Seca3g07497 521 Coils Coil 344 364 - -
Seca3g07497 521 SUPERFAMILY Cytochrome P450 50 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07497 Seca-Chr3 183123481 183125574 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07497 19 513 Cytochrome P450 AT1G13110 40.631 6.83e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07497 K20617 - gmx:100785621 727.243