Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07469 ATGTATGCGCATAATGTTGGATTTAGTGTGCATTGCTCTTCGGAAACTAAAGATAAAAATGGTGTGAAGCGTTGGAAGTATCTTGTTTGCTTAAAACAAGGTTACAATCCAGATAAGACAAAAGTTGTGGAACAAAGCGAAACAACTGTTAAGTCTAGGAGAAGGAGTCTTACAAGAGAAGGATGCAATGCAAATGTTGTTTTCAAACTAGTGGGTGAAGGTAAATATGAGCTTATTTGA 240 0.3625 MYAHNVGFSVHCSSETKDKNGVKRWKYLVCLKQGYNPDKTKVVEQSETTVKSRRRSLTREGCNANVVFKLVGEGKYELI. 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07469 79 Pfam FAR1 DNA-binding domain 2 78 IPR004330 -
Seca3g07469 79 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07469 Seca-Chr3 182351926 182352165 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g07469 FAR1 2.9e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07469 - - ccaj:114916444 132.88