Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07429 ATGGAAACTTCAAATGGTTTTTCAAACTTGAGAAACTCTCAACACACAGGAGCATCGTTTCTATTGCCCCCTAAAAGTACATCTGAAGTTGAATTTTTCTCCCATTCAATTGCTGAATTTGAAGGATTCTCAGAGCCCAATGAGGGACTAAGGCGCCACCAACGTACATATTCTGATAGTATGCTGAGTGAGGAAATACCCTCTTGGTTGAATGAACTTCTTGATGAGCCAGACACACCTATATGCAAGAGTCATAGACGATCAGCAAGTGATTCCTTAGCATACTTACAATTTCAAAATTCGGGTGAGGAATCTGAAAGGCATTCAGTTTCTCCACAGGAGTTAGATGCTACACAATCAGACAAGTTTGAAAAACAAAATGTAGTAGACCCACAAGGCTCCTTTTTGCAACATCGTTGCTTAAATTCCAATCCTTCAGCAAGTAGAACAGAGTCAAAACGTGCCAAAAGGCATTCAGCTCAACAACAAAGGGCCAGGAAAGTTCAATACATTTCTGAACTTGAAAGAAGTATTCATGCTCTACAAGCAGAAGGATATGAAGTTTCAGCGGAGCTTGAATTTCTTGATCAGCAACACCTCATATTAGGCATGGAGAACAGGGCCCTCAAACAACGGTTGGAAAGTTTATCCCAAGAGCAGTTCATCAAATGCTTGGAGCAGGAAATGCTAGAGAAAGAAATTTCTAGGCTTCGAAATCTTTATCAACAGCAGCATCAGCAACAACAACAACAGAAGCATTATGGTAGGCCTCGATCTAAACGTCAAGATCTTGATTCCTCATTTGCCAAACTTTCTTTGAAGAATAAGGGAACTGAATTGCAGAAAGCCAAATGA 855 0.4035 METSNGFSNLRNSQHTGASFLLPPKSTSEVEFFSHSIAEFEGFSEPNEGLRRHQRTYSDSMLSEEIPSWLNELLDEPDTPICKSHRRSASDSLAYLQFQNSGEESERHSVSPQELDATQSDKFEKQNVVDPQGSFLQHRCLNSNPSASRTESKRAKRHSAQQQRARKVQYISELERSIHALQAEGYEVSAELEFLDQQHLILGMENRALKQRLESLSQEQFIKCLEQEMLEKEISRLRNLYQQQHQQQQQQKHYGRPRSKRQDLDSSFAKLSLKNKGTELQKAK. 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07429 284 CDD bZIP_plant_RF2 153 199 IPR044759 GO:0003700|GO:0006355
Seca3g07429 284 MobiDBLite consensus disorder prediction 1 21 - -
Seca3g07429 284 Gene3D Classic Zinc Finger 145 199 - -
Seca3g07429 284 MobiDBLite consensus disorder prediction 134 149 - -
Seca3g07429 284 MobiDBLite consensus disorder prediction 241 284 - -
Seca3g07429 284 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 9 113 IPR044797 -
Seca3g07429 284 MobiDBLite consensus disorder prediction 134 166 - -
Seca3g07429 284 SUPERFAMILY Leucine zipper domain 157 202 IPR046347 GO:0003700|GO:0006355
Seca3g07429 284 MobiDBLite consensus disorder prediction 99 117 - -
Seca3g07429 284 MobiDBLite consensus disorder prediction 99 121 - -
Seca3g07429 284 Coils Coil 227 247 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca3g07429 Seca-Chr3 181416468 181419574 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07429 149 223 bZIP Transcription Factor Family AT2G42380 52.000 1.78e-17 78.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07429 - - lja:Lj0g3v0293819.1 248.054