Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07414 ATGGTTCAGAAGCATCTTCAGCTGAGGATAGAGGCTCAAGGAAAATACATGCAGAGTATATTGGAGAAGGCTTATAACACACTTGCAGGTGAAAACAACATGGCAACTGCTGCTACAAACATAAAGGGTGGTATTGGAGCACATCAAGGCATGATCCCTGACATGAAAGAATTTGGTTGCCCTCCTCTTAATTTTTCTTCTTTTCAAGATCTTAACCTTTATGGTGGTAGTAGTAGTAGTGGGGACCAACTTGATCTTCATCAGCAGAACATGGATGGGTTTATGCCAACTAATGAGAATTTATTTGTGGGGAAGAAAAGGCCTAACCCTTATACTGGAAAGAGCCCATTGATTTGGAATGATGATCTCAGGCTTCAAGATTTGGGAACTTCTTCATCATGCCAAGATGTTACTTTCAAAGGTGACCAGATTCAGATTGCACCACCATCAATGGATAGATCAGGTGGTGATAGTGATCCCATGTCTGAGATATATGACACCAAGCCAGTGCTTCAAGGAGATCAAACTGTAGGGGAAAAGAAATTTGATGCATCTATGAAACTTGAAAGGCCTTCACCAGTTAGAACAGATCAAAGGATGAGTCCTATGATCAATACTGGTAGAAGCTCACCATTTGGTTTCACTATGTAA 651 0.4086 MVQKHLQLRIEAQGKYMQSILEKAYNTLAGENNMATAATNIKGGIGAHQGMIPDMKEFGCPPLNFSSFQDLNLYGGSSSSGDQLDLHQQNMDGFMPTNENLFVGKKRPNPYTGKSPLIWNDDLRLQDLGTSSSCQDVTFKGDQIQIAPPSMDRSGGDSDPMSEIYDTKPVLQGDQTVGEKKFDASMKLERPSPVRTDQRMSPMINTGRSSPFGFTM. 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07414 216 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 82 IPR044848 GO:0003700
Seca3g07414 216 MobiDBLite consensus disorder prediction 180 194 - -
Seca3g07414 216 MobiDBLite consensus disorder prediction 178 216 - -
Seca3g07414 216 MobiDBLite consensus disorder prediction 198 216 - -
Seca3g07414 216 Pfam MYB-CC type transfactor, LHEQLE motif 2 26 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07414 Seca-Chr3 181012792 181013769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07414 2 213 G2-like Transcription Factor Family AT1G79430 43.043 7.56e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07414 - - lang:109333685 253.832