Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07404 ATGGTTTGCCCTATCATAGTTGAGGATCTTAATCATCCTCGTCAGATTCTAGTGGAGATGCTTTGTGAGGAACGAGGTTTCTTTCTAGAAATAGCTGACCTAATCAGAGGATTAGGTTTAACCATCTTGAAGGGAGTAATGGAATCTCCCAACGACAAGGTCTGGGCACGCTTCGCTGTTGAGGTATTACACCAGAAAGGGAAACTCATAATGAACTACTCATATTGCAAGGCAGTAGTCGTAGGGCATATGATCGGGGCACGCTTCGCTGTTGAGGTAATATCCCCATATTTTCTTTGTTGGGCAGATATAGAAAAATGGATCAAGATACTAGCTTCTCAGTCGTCTTCTCTGCAAGATGGTATGGTTTGA 372 0.4301 MVCPIIVEDLNHPRQILVEMLCEERGFFLEIADLIRGLGLTILKGVMESPNDKVWARFAVEVLHQKGKLIMNYSYCKAVVVGHMIGARFAVEVISPYFLCWADIEKWIKILASQSSSLQDGMV. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07404 123 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 62 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07404 Seca-Chr3 180492017 180492965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07404 1 62 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 74.194 9.57e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07404 - - aip:107624612 120.168