Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07394 ATGGCAGAGGAGTTGATTCTGTTGGATGAATGGCTTAGTATGTTTGGTATGAGAGCAAGGATAGCACTGGCTGAAAAAGAGATCAACTATGAGTACAAGGAACAGGATCTGATGAACAAGAGCCAACTGCTTCTGCAAATGAACCCAATTCACAAAAAGATCCCAGTTCTCATCCATCAAGGGAAACCCATTTGTGAGTCCATCACTATTGTTGAGTATATTGATGAGGTTTGGAAGGAGAAAGCTCCATTGCTACCCTCTGACCCTTATCAGAGAGCTCAAGCCAGGTTCTGGGCTGATTTTATAAACAAGCAGGTTGGTGATGTTGGGGGAAGGATATGGGCTGGAAAGCGAGATGATATTGAAGTGGCAAAGAAGGACTTAATAGATGGCTTAAAGGAATTGGAGAAGGTTCTTGGAGACAAGCCTTATTTTGGGGGTGACACATTTGGGTTTGTTGACATTGCTCTGATCCCTTTCTATAGTTGGTTTTATACTTATGAGACATTAGGCAACTTCAAAGTGGAGGCAGAGTGTCCTACGTTGATTGCTTGGGCCAAGAGATGCAAGCAGAGGGACAGTGTTTCCAAATCTGTTGCTGATGAGAAGGAGGTTTACCAGTTTGTTGTCAACTACAGGAAAAGTCTTGAGTTGAACTGA 660 0.4303 MAEELILLDEWLSMFGMRARIALAEKEINYEYKEQDLMNKSQLLLQMNPIHKKIPVLIHQGKPICESITIVEYIDEVWKEKAPLLPSDPYQRAQARFWADFINKQVGDVGGRIWAGKRDDIEVAKKDLIDGLKELEKVLGDKPYFGGDTFGFVDIALIPFYSWFYTYETLGNFKVEAECPTLIAWAKRCKQRDSVSKSVADEKEVYQFVVNYRKSLELN. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07394 219 CDD GST_C_Tau 89 209 IPR045074 GO:0004364|GO:0006749
Seca3g07394 219 FunFam Tau class glutathione S-transferase 1 87 - -
Seca3g07394 219 SUPERFAMILY Thioredoxin-like 6 105 IPR036249 -
Seca3g07394 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
Seca3g07394 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Seca3g07394 219 Gene3D Glutaredoxin 1 87 - -
Seca3g07394 219 FunFam Glutathione S-transferase U20 88 219 - -
Seca3g07394 219 Pfam Glutathione S-transferase, C-terminal domain 124 188 - -
Seca3g07394 219 CDD GST_N_Tau 5 78 - -
Seca3g07394 219 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Seca3g07394 219 SFLD Main (cytGST) 2 217 - -
Seca3g07394 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 212 IPR010987 -
Seca3g07394 219 Gene3D - 88 219 - -
Seca3g07394 219 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Seca3g07394 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07394 Seca-Chr3 179579880 179580958 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07394 1 216 Glutathione S-transferase Gene Family AT1G17180 62.500 1.81e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07394 K00799 - mnt:21386514 323.553