Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07392 ATGATCTCAGTTCTCATCCATCAAGGGAAACCCATTTGTGAGTCCATCATTATTGTTGAGTATATTGATGAGGTTTGGAAGGAGAAAGCTCCATTGTTACCCTCTGACCCTTATCAGAAAGCTCAAGCCAGGTTCTGGGCTGATTTTGTAAACAAGAAGGTTGGTGATGCTGGGGGAAGGATATGGGCTGGAAAGCGAGATGATATTGAAGTGGCAAAGAAGGACTTAATAGATGGCTTAAAGGAATTGGAGAAGGTTCTTGTAGACAAGCCTTATTTTGGGGGTGACACATTTGGGTTTGTTGATGTAACGTCCTAA 318 0.4245 MISVLIHQGKPICESIIIVEYIDEVWKEKAPLLPSDPYQKAQARFWADFVNKKVGDAGGRIWAGKRDDIEVAKKDLIDGLKELEKVLVDKPYFGGDTFGFVDVTS. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07392 105 SUPERFAMILY GST C-terminal domain-like 24 103 IPR036282 -
Seca3g07392 105 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 36 105 IPR010987 -
Seca3g07392 105 CDD GST_C_Tau 37 104 IPR045074 GO:0004364|GO:0006749
Seca3g07392 105 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 2 104 IPR045073 -
Seca3g07392 105 Gene3D - 35 105 - -
Seca3g07392 105 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 30 IPR004045 -
Seca3g07392 105 Pfam Glutathione S-transferase, N-terminal domain 4 24 IPR004045 -
Seca3g07392 105 SFLD Glutathione Transferase (cytosolic) 4 103 IPR040079 -
Seca3g07392 105 Gene3D Glutaredoxin 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07392 Seca-Chr3 179450382 179451118 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07392 2 104 Glutathione S-transferase Gene Family AT1G78340 62.136 4.23e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07392 K00799 - zju:107423437 158.303