Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07391 ATGCTTTTTTTCTTTGATGCCTTCAACTTTGTTGATGACAACAACGTGCAGAACAATGGTGGAGTTTTAGATCAGGTGGAGCCTGCAACTCGTGCTTCTATTGAGAATCTTGAAAGGATCACGATAGATGGAACAACAAAGTCTTCTTCAGTCACAGATACAGAGTCTACGTCTGTGTGCTCCATATGTCTTGAGGTGTTCTCAATTGGGTCAACAGCAATTCGCATGCCTAACCCATGTTGCCATGTCTTTCACGAACACTGCATCATTAGGTGGCTCAACACTTGTAACACATGCCCTTTGTGTCGCAAGAGCATTTAA 321 0.4299 MLFFFDAFNFVDDNNVQNNGGVLDQVEPATRASIENLERITIDGTTKSSSVTDTESTSVCSICLEVFSIGSTAIRMPNPCCHVFHEHCIIRWLNTCNTCPLCRKSI. 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07391 106 PANTHER SI:CH211-59O9.10 27 106 - -
Seca3g07391 106 Pfam Ring finger domain 60 103 IPR001841 -
Seca3g07391 106 SMART ring_2 60 102 IPR001841 -
Seca3g07391 106 SUPERFAMILY RING/U-box 59 106 - -
Seca3g07391 106 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 106 IPR013083 -
Seca3g07391 106 ProSiteProfiles Zinc finger RING-type profile. 60 103 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07391 Seca-Chr3 179424343 179424663 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07391 24 103 C3H Transcription Factor Family AT1G18760 34.091 7.52e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07391 - K22378 lang:109353994 101.679