Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07390 ATGAACAAGAGCCAACTGCTTCTGCAAATGAACCCATATATTGATGAGGTTTGGAAAGAGAAAGCTCCATTGCTACCCTCTGACCCTTATCAGAGAGCTCAAGCCAGGTTCTGGGCTGGTTTTGTAAAGAAGAAGGTTGGTGATGTTGGGGGAAGGATATGGGCTGGAAAGCGAGATGATATTGAAGTGGCAAAGAAGGACTTAATAGATGGCTTAAAGGAATTGGAGAAGGTTCTTGGGGACAAGCCTTATTTTAGGGGTGACACATTTGGGTTTGTTGACATTGCTCTGATCCCTTTCTATAGCTGGTTTTTATACTTATGA 324 0.429 MNKSQLLLQMNPYIDEVWKEKAPLLPSDPYQRAQARFWAGFVKKKVGDVGGRIWAGKRDDIEVAKKDLIDGLKELEKVLGDKPYFRGDTFGFVDIALIPFYSWFLYL. 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07390 107 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 13 103 IPR045073 -
Seca3g07390 107 Gene3D - 28 107 - -
Seca3g07390 107 SUPERFAMILY GST C-terminal domain-like 16 105 IPR036282 -
Seca3g07390 107 Pfam Glutathione S-transferase, C-terminal domain 64 105 - -
Seca3g07390 107 CDD GST_C_Tau 29 104 IPR045074 GO:0004364|GO:0006749
Seca3g07390 107 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 28 107 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07390 Seca-Chr3 179392741 179393564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07390 2 104 Glutathione S-transferase Gene Family AT1G78380 54.762 3.72e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07390 K00799 - csin:114268517 145.206