Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07374 ATGTGGGTGTGCTGGACTACTTGTATCCATGTCAAAGCCGCCAATGACAGTTTGAAGCCTGGAGAGACACTGGATACAAATATCACAAGCAAGCTATGTTCTAAAAAAGGTAAATATTGCATGGATTTTGACCCCATTTACCTGCGCATATATGCCCAGGGAGTTGATGATTGGGTAGTTTGGACTGCTAATAGAAATCAACCAGTTGACCCAGATTCTGCAGTTTTATTACTGGATCATTCTGGTGTGCTCAAAATTGAATCCAAAGATGATGAACCCATAATCCTTTACTCTCCACCTCAACCAATTAACAACACTGTGGCCACGTTGTTGGACACAGGCAACTTTGTGTTGCAACAACTTCACCCCAATGGGATGAAGAGTATGTTGTGGCAAAGTTTTGATTATCCTACTGACAGTTTGCTCCCTGGGATGAAGTTAGGTATCAATCACAAAACTGGTCATAACTGGTCTCTGGTTTCATGGTTTAGTCGTTTACTCCCATATCCTGGTCCATTCAGGCTTGATTGGGAACCAAAAAGAAGAGAACTTGTCATTAGTAAAGGAGGGCAAGTGTACTGGAGAAGTGGGGAACTCAGAAACAATAGATTTGAGCACGTTTCAGCAGAAGATGAAGCCCAGTACAGCACTGTGTCCAATGAGGATGAAGAGTATTTCATATTCACAACTCCAAAAGAAGAGCTTACAAAGTGGACGCTATTAGAAACTGGACAGATGTTAAACAGGAAAGGGAATGATATTGCAAGGGCTGATATGTGTTATGGTTACAACACTGATGGAGGATGCCAGGAGTGGGAGGAGATACCAACCTGCAGGGGTCATGATGATGAATTTAAGTTCATGGCTGGTTACCCCAATTTACACATGAAAACCGATCTGAAAAATGTGAGTTATGGCATAAGTGATTGCCAGGCTATTTGCTGGAGCAACTGCAGCTGCATTGGATTCGCATCCTTAAATGATAATGGAACTGGTTGTATGTTGTTCCAATCAATGGAAGGTACTAATATTGCAGGTGGTGGCGAATCCTTTTACATGCTAGGAAAGAAAACCAATCACAAAGGTACAACAAAGTGGATATGGATAAGTGTTGCAATAGCAACTGCTCTACTCATAGTCTGCCTTTCCATCATTTGTCGTGCCTTAATGAAAAGAAAATATGTGCTTCAAGAGAATAAAAGAAAGAGAATGAGGACTAAGATGCAAGATCTTGAAGCTTCAGGGGGCTCTTCTAGTGGCAACAATCTAGAAGTTGAAATAAACGATGGAGATGACTTAAAAGTATTTAGCTATGCATCCATAATGGAGGCTACCAATGGCTTTTCATCTGAAAACAAGTTAGGACAGGGAGGTTTTGGACCTGTTTTTAAGGGGATTCTATCTTCAGGGCAAGAAGTTGCTGTGAAAAAGCTTTCAAAAACTTCTGGACAAGGAGTTATTGAATTTAAAAATGAATTAACACTCATATCTAAGCTCCAGCACACAAATCTCGTTCAGCTACTCGGTCACTGCATTCATGAACAAGAGAGGATGTTGGTCTATGAGTATATGGCAAACAAAAGCTTGGACTTCTTTTTATTTGATTCTACTGGAAGAAAGTTACTGGATTGGAACAAACGTTTTAGCATAATAGAAGGAATTGCTCAAGGATTACTATACCTTCACAAATACTCAAGACTCAGAATTATCCACAGAGATTTGAAGGCTAGTAACATACTCCTGGATGAGAATATGAACCCAAAAATTTCTGATTTTGGTGTAGCAAGAATGTTTACAAAACATGAATCTGAAGCAAATACCAACAGGATTGTTGGGACATATGGTTACATGTCTCCAGAGTATGCCATGGAAGGAGTTTTCTCTACAAAGTCTGATGTGTATAGCTTTGGAGTGCTGATACTTGAAATTGTTAGTGGTAGAAGAAACAATAGCTTCTGCTCTGAAGAACGACCACTTAATCTAGTAGGACACGCATGGGAGCTATGGAAAGAAGGTGTGGTTCTTCAGTTGGTGGATCCAGCACTGCACAATTCATTTACTGATGATGAAGTGCTAAGATGTGTTCACGTTGGTCTATTATGTGTAGAAGAAAATGCAGACGATCGCCCCACCATGTCCAATGTTATATCGATGTTAACAAATAAAAGCACAGTAAATACTTTGCCTAAAAAACCTGCATATTATGTTAGAACAAGTGTCTTCGAGGATGAAACGTGCACTAAAGAATTTGGCGTGGATTCCATATATGAATATTCTGACTCCCATATATATTCAATGTAG 2301 0.3981 MWVCWTTCIHVKAANDSLKPGETLDTNITSKLCSKKGKYCMDFDPIYLRIYAQGVDDWVVWTANRNQPVDPDSAVLLLDHSGVLKIESKDDEPIILYSPPQPINNTVATLLDTGNFVLQQLHPNGMKSMLWQSFDYPTDSLLPGMKLGINHKTGHNWSLVSWFSRLLPYPGPFRLDWEPKRRELVISKGGQVYWRSGELRNNRFEHVSAEDEAQYSTVSNEDEEYFIFTTPKEELTKWTLLETGQMLNRKGNDIARADMCYGYNTDGGCQEWEEIPTCRGHDDEFKFMAGYPNLHMKTDLKNVSYGISDCQAICWSNCSCIGFASLNDNGTGCMLFQSMEGTNIAGGGESFYMLGKKTNHKGTTKWIWISVAIATALLIVCLSIICRALMKRKYVLQENKRKRMRTKMQDLEASGGSSSGNNLEVEINDGDDLKVFSYASIMEATNGFSSENKLGQGGFGPVFKGILSSGQEVAVKKLSKTSGQGVIEFKNELTLISKLQHTNLVQLLGHCIHEQERMLVYEYMANKSLDFFLFDSTGRKLLDWNKRFSIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDENMNPKISDFGVARMFTKHESEANTNRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLILEIVSGRRNNSFCSEERPLNLVGHAWELWKEGVVLQLVDPALHNSFTDDEVLRCVHVGLLCVEENADDRPTMSNVISMLTNKSTVNTLPKKPAYYVRTSVFEDETCTKEFGVDSIYEYSDSHIYSM. 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07374 766 Gene3D Phosphorylase Kinase; domain 1 411 523 - -
Seca3g07374 766 Coils Coil 394 414 - -
Seca3g07374 766 Gene3D Transferase(Phosphotransferase) domain 1 524 734 - -
Seca3g07374 766 SUPERFAMILY Protein kinase-like (PK-like) 432 739 IPR011009 -
Seca3g07374 766 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 164 IPR036426 -
Seca3g07374 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 569 581 IPR008271 GO:0004672|GO:0006468
Seca3g07374 766 SMART blect_4 15 137 IPR001480 -
Seca3g07374 766 PIRSF SRK 250 762 IPR024171 GO:0004674
Seca3g07374 766 PIRSF SRK 1 261 IPR024171 GO:0004674
Seca3g07374 766 ProSiteProfiles Bulb-type lectin domain profile. 15 131 IPR001480 -
Seca3g07374 766 CDD STKc_IRAK 454 721 - -
Seca3g07374 766 Pfam Protein tyrosine and serine/threonine kinase 451 719 IPR001245 GO:0004672|GO:0006468
Seca3g07374 766 ProSiteProfiles Protein kinase domain profile. 448 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g07374 766 SMART serkin_6 448 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g07374 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 524 727 - -
Seca3g07374 766 Pfam D-mannose binding lectin 59 162 IPR001480 -
Seca3g07374 766 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 117 739 - -
Seca3g07374 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 416 523 - -
Seca3g07374 766 Pfam PAN-like domain 299 336 IPR003609 -
Seca3g07374 766 Gene3D - 9 134 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07374 Seca-Chr3 178881422 178884579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07374 436 742 Receptor kinase-like Gene Family AT3G45860 58.252 2.08e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca3g07374 PK_Tyr_Ser-Thr 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07374 - - lja:Lj3g3v0392830.2 1042.34