Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07360 ATGGCACATCTCGGAGGCGCCGCAGAAACAGGTTTGGGAGATGATGATCTGTTTACACAACTATGGAAGTTGTGTGCAGGGCCTTTGGTGGATGTTCCTCGTGATGGAGAGCGAGTTTTCTACTTCCCTCAGGGTCACATGGAACAAGAACTGAGCCAGCAAATTCCTCATTTCAATCTCCCCTCTAAGATTCTCTGCCGTGTTGTGCACATTCAGTTGTTGGCGGAAAAAGAAACTGATGAAGTTTATGCTCGTATCACCTTGGTTCCAGAATCAAATCAAAATGAGCCGACAAGTCTCGACCCTAGTCTACCCGAGACCCAGAAACAGAAGTTTCACCATTTTAGCAAGATATTAACTGCCTCTGCTACTAGCACACATGGAGGATTTTCAGTTCTGCGGAGGCATGCTACCGAGTGCTTACCTGAATTGGACATGACCCAAACAACCCCAACCCAGGAACTAGCAGCCAAGGATCTTCATGGGTTTGAGTGGAAGTTTAAGCATATATTCAGAGGTAATTTGGTTTGGATTTCTGTTTTAGTTGCATATTCCAATTTCCAAGTTTGTATGAATGAATATCATGAGTAG 591 0.445 MAHLGGAAETGLGDDDLFTQLWKLCAGPLVDVPRDGERVFYFPQGHMEQELSQQIPHFNLPSKILCRVVHIQLLAEKETDEVYARITLVPESNQNEPTSLDPSLPETQKQKFHHFSKILTASATSTHGGFSVLRRHATECLPELDMTQTTPTQELAAKDLHGFEWKFKHIFRGNLVWISVLVAYSNFQVCMNEYHE. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07360 196 SUPERFAMILY DNA-binding pseudobarrel domain 99 174 IPR015300 -
Seca3g07360 196 Gene3D - 112 189 IPR015300 -
Seca3g07360 196 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 173 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07360 Seca-Chr3 178241175 178242439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07360 11 173 B3 DNA Binding Superfamily AT2G46530 70.175 9.81e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07360 K14486 - gmx:100820503 294.664