Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07335 ATGAACAACCCATGTGTCACTGATGCTTCTCTTCCCACCACTTTCCTGGGTCTTCTTCTTCTGCACTCCAGAGCCAGATCCACCCCTTGCAACAACACCCTTATCCCCACTCCCTCTGACCTCCTCAGGGACTTCGCCACAAGAGAATTCAATGCCTTTCTCTGGCTTTCTCTCCTCGTTGTCTCTGCCCTTTTGCTCAGGAAACTCTTCAAGCTCTTCACTTTGTTGCACTTCGCTAAAACCATTCCTGGGCCTCCTTGCCCCTCTTTCTTCGGCCACTGCAAGCTCCTTTCCCGGGAAAATTTCAGTGATGTGTTGTCAGAATCCCATAAGAGGTATGGACCAATTGTTAAGCTATGGTTAGGTCCTACTCAGCTTCTGGTGTCAGTTAAGGATCCATCGCTTATTCAAGAGATGCTTATAAAGGCTGAGGATAAGTTGCCTTTTACTGGAAAAGCATTTCATCTAGCCTTTGGGCAATCAAGCCTCTTTGCCCCTTCCTTTGAAAAGGTTCAAAAGAGAAGGGAGTTATTGGCAACTGAATTAAATGAACGAATGCTGAAGACTGCTGATCTGATTCCTATGAAGATTGCAGACTACATCATAGATAAAGTAGAAAACATCAGTGGAAGTATTGATTGTAGGTTGGTTTCTCAGCATATGGCTTTCACCATAATGGGAGCCACATTCTTTGGAGATGGCTTCTTGGCCTGGCCAAAGGCTGCAATATATGAGGAACTGCTAATGATGATTGCTAAAGATGCTTGCTTTTGGGCCTCCTATAATGTTACTCCTTTCTGGAAACGAGGATTTTGGAGGTATCAATGCTTATGTACAAAGCTAAGATGCCTAACTCAAGACATCCTTAAACATTGCAGAAAAAGCTACAAGATATTGGGCCATGTTGATCAAAGTGTTCACAGTGAAAGTTGCAAAATAGAAATGATGTCCGCAGATGGTGCACAATGCTGTTCTGATGAGTGCCAAAATGATCATCAAAATGCTAAAGAAGAATCTTGTGGGAATATCATGCGTGTGATGTTTCATGGATGTCAAACTACAGCTGCTTTAATTGCCAGTGTGTTGACCAATCTTGTCATGCATCTGGAAATACAAGATAAGGTTTATTCAGAGATTAGCATGGTCGGGAGAAACCCATCAAAATATGAGCATGAAGATATTTATAGGATGCCTTTGTTATTGGCTACAGTTTATGAATCTGCGCGCCTTCTCCCCACTGGTCCCATGCTGCAGAGGTGTTCTTTGAAACATGACTTGAGTTTTGCAAGTGGTGTAATCATACCTGCTGGAGCTGTAGTGGTTGTGCCTGTTCAATTGGTACAGAAGGATGAATCAAGTTGGGGGAGTGATGCAAGTGATTTTAATCCATACCGATTTCTCACAAATGGAACAAAAAGATCAGGTTCTGCTGAAGAACTTTCTAATTGTGGATTCGGCTCGTTTGCACTAAATGATCCAAATGAAAATGCAGCATTTCTCCCTTTTGGATCTGGTACACGTGCTTGTGTTGGGCAGAAATTTGTTATCCAAGTCGTTGCCACATTGTTGGCATCACTGCTCAAAAAATATAAGATAAGGCTTAATTCAGGAACAGATGATGACCCAAAACTACTCTTGAAGAATCATCTTCTTCAGCATCATCCTAATTCACCAATAATGTTTGTGAGAAGGGACCAGTGA 1701 0.4239 MNNPCVTDASLPTTFLGLLLLHSRARSTPCNNTLIPTPSDLLRDFATREFNAFLWLSLLVVSALLLRKLFKLFTLLHFAKTIPGPPCPSFFGHCKLLSRENFSDVLSESHKRYGPIVKLWLGPTQLLVSVKDPSLIQEMLIKAEDKLPFTGKAFHLAFGQSSLFAPSFEKVQKRRELLATELNERMLKTADLIPMKIADYIIDKVENISGSIDCRLVSQHMAFTIMGATFFGDGFLAWPKAAIYEELLMMIAKDACFWASYNVTPFWKRGFWRYQCLCTKLRCLTQDILKHCRKSYKILGHVDQSVHSESCKIEMMSADGAQCCSDECQNDHQNAKEESCGNIMRVMFHGCQTTAALIASVLTNLVMHLEIQDKVYSEISMVGRNPSKYEHEDIYRMPLLLATVYESARLLPTGPMLQRCSLKHDLSFASGVIIPAGAVVVVPVQLVQKDESSWGSDASDFNPYRFLTNGTKRSGSAEELSNCGFGSFALNDPNENAAFLPFGSGTRACVGQKFVIQVVATLLASLLKKYKIRLNSGTDDDPKLLLKNHLLQHHPNSPIMFVRRDQ. 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07335 566 PANTHER CYTOCHROME P450 FAMILY 4 58 547 - -
Seca3g07335 566 Pfam Cytochrome P450 84 553 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07335 566 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 502 511 IPR017972 GO:0005506|GO:0016705
Seca3g07335 566 PRINTS E-class P450 group I signature 499 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07335 566 PRINTS E-class P450 group I signature 358 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07335 566 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07335 566 PRINTS E-class P450 group I signature 509 532 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07335 566 CDD cytochrome_P450 114 558 - -
Seca3g07335 566 Gene3D Cytochrome P450 75 566 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07335 566 SUPERFAMILY Cytochrome P450 77 564 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07335 566 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07335 566 PRINTS P450 superfamily signature 500 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07335 566 PRINTS P450 superfamily signature 349 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g07335 566 PRINTS P450 superfamily signature 509 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07335 Seca-Chr3 177485363 177492957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07335 81 531 Cytochrome P450 AT1G13710 23.191 3.09e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07335 - - gmx:100809563 812.372