Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07326 ATGGCAGAAGCAGCAGTTTCGTTTGCCCTAGAGCAAGTGCTGGAATTCCTGAAAGAAAAAGCAACTATACTGAGAGGCGTGCATAGAGAATTTGCAGTTATAAAAGATGAACTTGAAAGCATTGTAGCCTTCCTCAAAGATGCAGAAAGAAAGGCAGCAGATGAAGGAAATTCCAGCGATGGAATAAAGACATGGGTGAAGCAGCTCAGAGAAGTATCTTTTCGCATAGAAGATGTCATTGCTGAGTACAACTTTTATGTCGCACAGGGGACACGTCATCCTGGTTTCCTCAAAAGGATTTCTCACAAGATCAAAACAGTGAAGCCTCTTTATCGGATAGCATCTGAGATTCAAGAGATAAAATCAGATGTTCATGAAATCAGAAAGAGAGGTAAAAGTTACAACCTTCAGTCTTTACTTGAGCATGGATCAAGTAGCAACCTTAGTAGCAAATGGCATGATCCTCGATTGGCTTCCCTTTTCATTGAAGAAACTGAAGTTGTGGGATTTGAAAACCCTAGGGATCAACTGGTTAGTTGGTTAGTGAATGGAGAAGCAACTCGCACTGTGGTTTCAGTTGTAGGAATGGGAGGACTTGGAAAAACAACTCTAGCCAGAACTGTTTTTGACAACCACAGGGTGAAAGGGCACTTTGATGTCCGTGCTCTCATCACAGTTTCTCAAACATACACTGTAGAAGCCTTGCTAAGGAACATTTTGGAGCAATTCTATAAGGAGACCAATAAGCCGCTTCCTCAAGGCATAAACACTATGGATACAGTGTCACTTGTAACTGAAATGAGGCATTACTTGCAGGAGAAGAGGTATGTAATTGTCTTTGATGATATATGGAATGTCAATTTTTGGGATGAGTTTCAATTTGCTACAATTGATAATAAGCTTGGAAGTAGGATAATAATCACAACTAGGAACTTGGATGTTGCAAATTATTGTAAGAAATCTTCTCTTGTTCAAGTGCACGAGTTGCAACCCTTACCTCAGAAAAAAGCATGGGAACTCTTCTGCAAGAAGGCATTTCAGTTTCATTCTGATGGAAATTGTTCACCAGAGCTGGAAGATATGTCTAATGAAATTGTTAAAATATGCCAGGGATTGCCACTTGCAATTGTGGCCATTGGAGGTCTTTTGTCAACCAAAGACAAAACTCTGTTTGAATGGAAAAAGATATACCAAAACCTTAATTTTGAGCTAGAGCGAAATCCCCATTTAACTAGTTTAACTAGAATTTTAGCCCTCAGTTATGATGACTTGCCCTACTATTTGAAATCATGTATCTTGTATTTTGGAATATACCCAGAGGACTACTCCATCAAGTGCATGAGATTGGTTAGGCAGTGGATAGCTGAGGGGTTTATTATATATGAAGGGGAAAAGGCATTGGAGGAAGTTGCACAACAATACTTGACAGAGCTGATCCATAGAAGTTTGGTTCAAGTTTCCAAATTTGATTATGAAGGGAAAGCTTCAAGTTGCCGAGTCCATGATATGCTACGTCAAACGATCATTACAAAAATCAAAGAGTTAAGCTTTTGTCATGTTGTTCATGAAGATGATCAACCAACCCCTAATGTAACAGCTCGACGCTTGGCCATAGCCACTAGTTCTAGTGATGCGCTTAGAACCATTGCACAATCCTCACAAATCCGATCCATGTATATTTTTGGAGCAACTCGGTTGCCTGATGACTTCTTGAGTTGGTTCTTTGCCAAGTCTAGGCTTTTGAAAGTGTTGGATTTGGAAGGTACATCATTGAATTATGTTCCTAATGATTTGGGGAATATTTTTCACTTGAGGTACTTGAGCTTAAGAAAAACAAATGTTAAGTGCATCCCAAAATCCATTGGTAGACTGCAGAACCTAGAAACTTTAGATCTGAAAGAAACACAAGTGCATGAATTGCCAAGTGAGATAAACAAGCTCAAAAAGTTACGCCATCTTCTAGTTTACTATAGAGAAAGGATTTTTACTACTGATGTTCATGGTGAAACTGGTGTTCAGTTGCAGGGAAGTATTGGAAATTTGACATTCCTACAAAAGCTTTATCATGTGGAGGCAGATCATGGTGGACCAAAGCTAATAATTGAGCTGAAAAAGTTGAGGCAATTAAGGAAGTTGGGCTTAAAAAAAGTGAGGAGAGAATTTGGAAACACTCTATGTGACTCAATACAAGAGATGAACTGCCTTGAATTTCTTTCTGTTACTGCAATAAGTGAAGATGAAATCATAGATTTGCAATTTATTTCATCTCTCCCTCAACTTCAAAAGCTTCATTTGTTTGGTCGCTTAGAAAAGTTGCCAGAATGGGTTTCAAGACTTGAGTGTCTTGTTAGGTTGTCAATTCGTTTTTCCAAGCTGAAGGATGATCCACTGAAGTCACTTAAAGACCTGCCAAACTTGTTGCGTCTCTCAATTTCAGGTGAAGCATATGTTGGTGAAACGTTGCATTTCCAACTGGGATTTCAGAAATTGAAGAGACTGTATGTTATGAACTTGAAGAAGCTAAATTCAATTGTTATAGAGAGTGGAGCTTTACCTGCTCTTCAACAAACTCAACTGATGCGGTTGCCCCAACTAAAGGAGATGCCCTCTAGCTTCCACCTGCTACAAAGCCTTGAATCTTTATATTTGACTGATATGCCACATGAATTCAACCAAAGCATTGATCCAAATCATGGACCTAAGTACTGGGTCATCAAACATGTGCAAGTTGTATCCATCAGAGAGAGGGTTGGCCCACATCCTTTTCATTACAACTATCGTACTATTCATCACTCAAGGGATATGAAGTATATATGA 2817 0.3912 MAEAAVSFALEQVLEFLKEKATILRGVHREFAVIKDELESIVAFLKDAERKAADEGNSSDGIKTWVKQLREVSFRIEDVIAEYNFYVAQGTRHPGFLKRISHKIKTVKPLYRIASEIQEIKSDVHEIRKRGKSYNLQSLLEHGSSSNLSSKWHDPRLASLFIEETEVVGFENPRDQLVSWLVNGEATRTVVSVVGMGGLGKTTLARTVFDNHRVKGHFDVRALITVSQTYTVEALLRNILEQFYKETNKPLPQGINTMDTVSLVTEMRHYLQEKRYVIVFDDIWNVNFWDEFQFATIDNKLGSRIIITTRNLDVANYCKKSSLVQVHELQPLPQKKAWELFCKKAFQFHSDGNCSPELEDMSNEIVKICQGLPLAIVAIGGLLSTKDKTLFEWKKIYQNLNFELERNPHLTSLTRILALSYDDLPYYLKSCILYFGIYPEDYSIKCMRLVRQWIAEGFIIYEGEKALEEVAQQYLTELIHRSLVQVSKFDYEGKASSCRVHDMLRQTIITKIKELSFCHVVHEDDQPTPNVTARRLAIATSSSDALRTIAQSSQIRSMYIFGATRLPDDFLSWFFAKSRLLKVLDLEGTSLNYVPNDLGNIFHLRYLSLRKTNVKCIPKSIGRLQNLETLDLKETQVHELPSEINKLKKLRHLLVYYRERIFTTDVHGETGVQLQGSIGNLTFLQKLYHVEADHGGPKLIIELKKLRQLRKLGLKKVRREFGNTLCDSIQEMNCLEFLSVTAISEDEIIDLQFISSLPQLQKLHLFGRLEKLPEWVSRLECLVRLSIRFSKLKDDPLKSLKDLPNLLRLSISGEAYVGETLHFQLGFQKLKRLYVMNLKKLNSIVIESGALPALQQTQLMRLPQLKEMPSSFHLLQSLESLYLTDMPHEFNQSIDPNHGPKYWVIKHVQVVSIRERVGPHPFHYNYRTIHHSRDMKYI. 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07326 938 Gene3D - 4 114 - -
Seca3g07326 938 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 435 IPR027417 -
Seca3g07326 938 Pfam Rx N-terminal domain 5 95 IPR041118 -
Seca3g07326 938 Gene3D Ribonuclease Inhibitor 542 900 IPR032675 -
Seca3g07326 938 Pfam NB-ARC domain 173 423 IPR002182 GO:0043531
Seca3g07326 938 CDD RX-CC_like 2 129 IPR038005 -
Seca3g07326 938 Gene3D - 332 420 IPR042197 -
Seca3g07326 938 Gene3D - 155 326 IPR027417 -
Seca3g07326 938 FunFam Probable disease resistance protein At1g63360 421 510 - -
Seca3g07326 938 SUPERFAMILY L domain-like 499 911 - -
Seca3g07326 938 PRINTS Disease resistance protein signature 270 284 - -
Seca3g07326 938 PRINTS Disease resistance protein signature 622 638 - -
Seca3g07326 938 PRINTS Disease resistance protein signature 369 383 - -
Seca3g07326 938 PRINTS Disease resistance protein signature 190 205 - -
Seca3g07326 938 Gene3D - 421 511 IPR036388 -
Seca3g07326 938 FunFam Probable disease resistance protein At1g61300 152 322 - -
Seca3g07326 938 PANTHER DISEASE RESISTANCE PROTEIN RP 33 851 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07326 Seca-Chr3 175222925 175226298 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07326 190 388 WRKY Transcription Factor Family AT5G45050 31.034 4.74e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07326 K13457 - gmx:100801561 995.727