Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07324 ATGGCAGAAGCAGCAGTTTCGTTTGCCCTAGAGCAAGTGCTGGAATTCCTGAAAGAAAAAGCAACTCTACTGAGAGGCGTGCATAGAGAATTTGCAGATATAAAAGATGAACTTGAAAGCATTGTAGCCTTCCTCAAAGATGCAGACAGAAGAGCTGCAGATGAAGGAAATTCAAAAGATGGAATAAAGACATGGGTGAAGCAGCTCAGAGAAGTATCTTTTCGCATAGAAGATGTCATTGCTGAGTACAACTTTTATGTCGCACAGAGGACCCATCATCCTGGCTTCAAAGCTTTCCTCCAAAAGATCAAAACATTAAAGCCTCTTCATCAAATAGCATCTGAGATTCAAGACATTAAATCCTCAGTTCGTGGAATCAAAGAAAGAAGTGAAAGGTATAATTTTCAGTCTTCACTGGAGCATGGATCTAGAGGGAACCAAAGTGGAAAATGGCATGACCCTCGATTGGCTTCTCTTTTCATTGAAGAAGCTCAAGTCGTGGGATTTGAAAACCCAAGGGATCAACTTGTTGGTTGGTTAGTGAATGGAGAAGCAGCTCGCACTGTGGTTTCAGTTGTAGGAATGGGAGGACTTGGAAAAACAACTCTTGTCAAAAATGTCTTTGACAACCAGCAGCAGAAGAGGAACTTTGATTGTCATGCATTTGTCATAGTTTCTCAATCATATACTGTTGAAGCATTATTGTGGAACATGATGAAACAGTTTTGTGAAGAAACTAAGGAGCCTCTTCCTCAAGGTATAAACACAATGGACAAAATGTCACTCATTACTATGACCAGGCATTACCTGCAGGACAAGAGGTATGTAATCTTCTTTGATGATGTATGGAAAGTAGACTTTTGGGATGAGATTCAACTTGCTACTCTTGATAACAACATAGGAAGTAGGATAGTAATCACAACCAGGAACTTGGAAGTGGCAACTTTTTGTAAGAAAGATTCCCATGTTCAAGTGCACAAGTTGAAACCCCTTCCTTCAAACAAAGCATGGGAACTCTTCTGCAAGAAGGCATTTCAATTTGACTTCAATGGAAATTGTCCATCAGAGCTAGAAGATATGTCCAATGAAATTGTTAGGAAATGTGAGGGGTTGCCACTTGCGATTGTGGCCATTGGAGGTCTTTTGTCAACCAAAGACAAATCTGTCTTTGAATGGAAAAAATTATGCCAAAATCTTAGTTTTGAGCTAGAGAGAAATCCCCATTTAACTAGTTTAACTAGAATTTTGGCCCTCAGTTATGATGACTTACCCTACTATTTGAAAGCATGTATCTTGTATTTTGGAATATATCCAGAGGACTACTCCATCAGGTGCATGAGATTGGTTAGGCAATGGATAGCTGAAGGCTTTGTTATAAATGAGGACCAAAAGGAAAAAACTTTGGAGGAAGTTGCAGAACAATACTTGACAGAGTTGATCCACAGAAGCTTGGTTCAAGTCTCCAGAGTTGACTATGATGGGAAAGCTTCAAGTTGCCGAGTCCATGACTTGCTACGTGAAATGATCATAAGAAAAATGAAGGACTTGAGTTTCTGTCGGGTTGTTCATGAAGATGATCAACCAACCTCTGATGTAACAACTCGACGCTTAGCCATAGCAACTAATTCTAGTCCATGTACATGTTTTGAAGCAGGTGAATTGCCAGATCACTTTTTGAGTAGGCTCTTTTCGAAATCTAAGCTTTTGAATGTGTTGGATTTTGAAGGTGCATCATTATTGAAGTACTTGAGCTTAAGAAAAACAAATGTTAAGTGCATCCCAAAATCCATCGGTAAACTGCAGAATCTAGAGACCTTGGATTTAAAAGAAACACAAGTGCATGGCTTACCAAGCGAGATAAACAAGCTCAAAAAGTTACGCTATCTTCTCGTTTTCTACAGAAGCACAGGTAATAATATTGATCGTATCGAAAACTTGACATTTCTACAAAAGCTTTATCATGTGGAGGCAGATCATGTTGGATTAAAGCAAATATCAGAGCTAAGAAAGCTAAGGCAGTTAAGGAAGTTGGGCTTAAAGAATATAAAGAGAGAATTCGGAAAGATTCTATGTGAGTCAATACAGGAGATGAATTTCCTTGAATCTCTTCACGTTAGTGCTATAACTGAAGATGAAATCATAGATTTGCAATTTATTTCATCTCTCCCTCAACTTCGAAAACTCCACTTGTTTTGTCGCTTAGAAAAGTTGCCAAGCTGGGTTACAAGACTTGAGCATCTTGTTAGGTTGTCAATTCATTTTTCCAAGTTGAAGGATGATCAACTGAAGTCACTTAAAGATCTACCAAATTTGTTGCGTCTCTCAATTTCACGTGAAGCATATGTTGGTGAAACATTGCATTTCGAAGTGGGATTTCTGAAATTGAAGAGGCTATATCTTGTAGACTTGAATAAACTGAATTCCATAGTTATAGATAATGGAGCTTTACCTGCTCTTCAACGAATTCAAATGATGCGGTTGCCCCAACTAAAGGAGATGCCCTCTACCTTCCACCTGCTAGAAAGCCTTCAAACACTCTACTTGACTGATATGCCACATGAGTTCAACCAAAGCATTGATCCAAATCATGGACCCAAGTACTGGGTCATCCAACATGTGCCACTCGTATCCATTAGAGAGAGGGTTGGTCCAATTCCTTTTCACTACAACTATCGCACTATTCGTCATTCAAAAGATAAATGA 2703 0.3903 MAEAAVSFALEQVLEFLKEKATLLRGVHREFADIKDELESIVAFLKDADRRAADEGNSKDGIKTWVKQLREVSFRIEDVIAEYNFYVAQRTHHPGFKAFLQKIKTLKPLHQIASEIQDIKSSVRGIKERSERYNFQSSLEHGSRGNQSGKWHDPRLASLFIEEAQVVGFENPRDQLVGWLVNGEAARTVVSVVGMGGLGKTTLVKNVFDNQQQKRNFDCHAFVIVSQSYTVEALLWNMMKQFCEETKEPLPQGINTMDKMSLITMTRHYLQDKRYVIFFDDVWKVDFWDEIQLATLDNNIGSRIVITTRNLEVATFCKKDSHVQVHKLKPLPSNKAWELFCKKAFQFDFNGNCPSELEDMSNEIVRKCEGLPLAIVAIGGLLSTKDKSVFEWKKLCQNLSFELERNPHLTSLTRILALSYDDLPYYLKACILYFGIYPEDYSIRCMRLVRQWIAEGFVINEDQKEKTLEEVAEQYLTELIHRSLVQVSRVDYDGKASSCRVHDLLREMIIRKMKDLSFCRVVHEDDQPTSDVTTRRLAIATNSSPCTCFEAGELPDHFLSRLFSKSKLLNVLDFEGASLLKYLSLRKTNVKCIPKSIGKLQNLETLDLKETQVHGLPSEINKLKKLRYLLVFYRSTGNNIDRIENLTFLQKLYHVEADHVGLKQISELRKLRQLRKLGLKNIKREFGKILCESIQEMNFLESLHVSAITEDEIIDLQFISSLPQLRKLHLFCRLEKLPSWVTRLEHLVRLSIHFSKLKDDQLKSLKDLPNLLRLSISREAYVGETLHFEVGFLKLKRLYLVDLNKLNSIVIDNGALPALQRIQMMRLPQLKEMPSTFHLLESLQTLYLTDMPHEFNQSIDPNHGPKYWVIQHVPLVSIRERVGPIPFHYNYRTIRHSKDK. 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07324 900 Gene3D - 420 513 IPR036388 -
Seca3g07324 900 FunFam Probable disease resistance protein At1g61300 152 322 - -
Seca3g07324 900 Gene3D Ribonuclease Inhibitor 547 864 IPR032675 -
Seca3g07324 900 CDD RX-CC_like 2 128 IPR038005 -
Seca3g07324 900 Gene3D - 4 113 - -
Seca3g07324 900 PANTHER DISEASE RESISTANCE PROTEIN RP 33 819 IPR044974 GO:0006952
Seca3g07324 900 FunFam Probable disease resistance protein At1g63360 420 511 - -
Seca3g07324 900 SUPERFAMILY L domain-like 550 879 - -
Seca3g07324 900 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 434 IPR027417 -
Seca3g07324 900 Gene3D - 331 419 IPR042197 -
Seca3g07324 900 Pfam Rx N-terminal domain 5 97 IPR041118 -
Seca3g07324 900 Gene3D - 156 325 IPR027417 -
Seca3g07324 900 Pfam NB-ARC domain 172 422 IPR002182 GO:0043531
Seca3g07324 900 PRINTS Disease resistance protein signature 368 382 - -
Seca3g07324 900 PRINTS Disease resistance protein signature 189 204 - -
Seca3g07324 900 PRINTS Disease resistance protein signature 269 283 - -
Seca3g07324 900 PRINTS Disease resistance protein signature 598 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07324 Seca-Chr3 175160263 175163435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07324 190 387 WRKY Transcription Factor Family AT5G45050 29.000 1.06e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07324 K13457 - gmx:100801561 989.178