Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07321 ATGGATTTAAATAGTGATGATTCAGCTGTTAATCTGGAAGATGATAGAGACCTAAGTTATAGTGATTCTTCTAGCTCTAGCGATGATGAGAATCATAATGAAAATGATAGAGTAACAGATACTGAGGATGAAGTTAATGAAGAAGAGGCAGACACTGATGAGGTAAATGAATTTATGGATGCAGAAGTTGGAGGGGAGGTGTCAAGGAGGATAATTGATTTGAAAAATGATGATATATGGGCATGGGAATTCTGTACTGAAAATGATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTCATGGATTTGCTTTGAGGAGGGATGATGTAATTAAAGACAGTAAAGGTATGGTCATAATGCGACAGTTCTTATGTAGTAGGGCTGGTTTGAGGGACAAAAAGCATTTGATTAGATTAGATCGGAAAAAGGAACATAGGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCACTTTGATTATAAGACTGGGAAATTTAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGATTTGACCCCTGCTAAATTTGTTCCTTTAATGCCTGCATATCGTGGTTTGAGTGATGGCGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCTTGTCAAATAATGGGTTTTCTTGTTGATCTAAAAGGAGGATATAGAAACGTTGGTTTTTCAAAGAAAGATTTATACAACTACATAGATGAGGTTAGGAGGGGTAAGATAAAAGATGGGGATGCAGTGGTTGGGTTAAGCTATTTGCAAGGAAAGGCAGATAACAATCCAATGTTTTTTTCAAGATTTTTATGTTCTGAGGATGGGAAACTCACTCATTTGTTTTGGTGTGATGAAATAAGTCGGGCAGACTATCAATTTTTTGGTGATGTGCTTGCATTTGATGCAACCTACAAGAAGAATAGGTATAAATATCCACTGGTGATTTTTTCTGGTAAAAATCACCACTCTCAGACAGTTATATTTGGGTGTGCACTCATTGCTGATGAAACAATCGATACTTATAAGTGGGTTTTAAGAATGTTTTCAGAAGCAATGTTCAACAAGCATCCAGCTGCAACTGTGACTGATGGTGATGGTGCGATGAGGGAAGCTATTAAGGTAGTTTTTCCAAATGCTGCTCATAGGTTATGCGGGTGGCATTTGAATAAAAATGCATGTGAAAATGTTAAGAATCCTAAATTTTTGGATGATTTCAAGAAAGCAATGTACAGTAATTTCACACCAGAAAGATTTGAACAGTTTTAG 1287 0.3652 MDLNSDDSAVNLEDDRDLSYSDSSSSSDDENHNENDRVTDTEDEVNEEEADTDEVNEFMDAEVGGEVSRRIIDLKNDDIWAWEFCTENDAFNFYFSYAKCHGFALRRDDVIKDSKGMVIMRQFLCSRAGLRDKKHLIRLDRKKEHRPLTRTNCQAKLRVHFDYKTGKFKVVSFLDSHNHDLTPAKFVPLMPAYRGLSDGDKAQVDALHSHGVRPCQIMGFLVDLKGGYRNVGFSKKDLYNYIDEVRRGKIKDGDAVVGLSYLQGKADNNPMFFSRFLCSEDGKLTHLFWCDEISRADYQFFGDVLAFDATYKKNRYKYPLVIFSGKNHHSQTVIFGCALIADETIDTYKWVLRMFSEAMFNKHPAATVTDGDGAMREAIKVVFPNAAHRLCGWHLNKNACENVKNPKFLDDFKKAMYSNFTPERFEQF. 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07321 428 PANTHER OS01G0519700 PROTEIN 82 427 - -
Seca3g07321 428 MobiDBLite consensus disorder prediction 9 39 - -
Seca3g07321 428 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Seca3g07321 428 Coils Coil 31 51 - -
Seca3g07321 428 MobiDBLite consensus disorder prediction 40 55 - -
Seca3g07321 428 MobiDBLite consensus disorder prediction 1 55 - -
Seca3g07321 428 Pfam MULE transposase domain 304 398 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07321 Seca-Chr3 174951534 174952820 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g07321 MULE 1.7e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07321 - - ccaj:109794460 495.738