Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07295 ATGGCATCCAGCTCAACACGCACTGGCACTGGCTCATGGAGTTCTAGGAGGGACGATAAGGCCTTTGAAAATGCTATAATTCTTTATGACAAGAACACCCCTGACCGTTGGGACAAAGTTGCTAAAGCTGTTGGTGGTGGGAAGACACCAGAGGAAGTAAAAAGGCACTATGAGATCCTCATCATGGATCTTGAGAACATTGAAGCAGGGAAAGTGCCATTACCAAATTATATAGAAGAAGAAGAGTTGAAGGGTCAGATGAGGAGCCAAGGTGATGAGAAACTTGAAGCTCCAGTGACCAGTTGA 306 0.4542 MASSSTRTGTGSWSSRRDDKAFENAIILYDKNTPDRWDKVAKAVGGGKTPEEVKRHYEILIMDLENIEAGKVPLPNYIEEEELKGQMRSQGDEKLEAPVTS. 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07295 101 SMART sant 9 63 IPR001005 -
Seca3g07295 101 SUPERFAMILY Homeodomain-like 15 64 IPR009057 -
Seca3g07295 101 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 89 IPR044636 GO:0003700
Seca3g07295 101 CDD SANT 12 57 IPR001005 -
Seca3g07295 101 Gene3D - 3 74 - -
Seca3g07295 101 FunFam Transcription factor SRM1 5 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07295 Seca-Chr3 173588849 173589811 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca3g07295 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07295 - - gmx:100778660 103.219