Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07266 ATGCCTTTTGAGAAGCAACTGACAAAAAGCGATTTGAGGGTAGATCAAAATAGATTGTTGTTGAACAAGAATCATGTGGAAACATCTTTCTTGCCCTTGTTGAGAGAAGATGAAAGCATTAAGGAAGGGATAGCAGTCATTGCCTATAATATGGATGGCAATATGTTTGCCATGACATTCAAGATTTGGGCAGATAAGTACTATGTGCTTATGGGAGGGTGGAAAGCTTTCTTCCAAACACATACATTGCAAATTGAAGATTATGTCAAAGTGTGGATGTTTCATCATTCGGAAACCAACAAGCTATGTTTTGCTAAAAAGACTAAAAACATCTAG 336 0.369 MPFEKQLTKSDLRVDQNRLLLNKNHVETSFLPLLREDESIKEGIAVIAYNMDGNMFAMTFKIWADKYYVLMGGWKAFFQTHTLQIEDYVKVWMFHHSETNKLCFAKKTKNI. 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07266 111 SUPERFAMILY DNA-binding pseudobarrel domain 3 107 IPR015300 -
Seca3g07266 111 Gene3D - 1 110 IPR015300 -
Seca3g07266 111 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 2 105 IPR005508 GO:0003677
Seca3g07266 111 CDD B3_DNA 3 104 IPR003340 GO:0003677
Seca3g07266 111 Pfam B3 domain-containing protein At2g31720-like 3 76 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07266 Seca-Chr3 172396105 172396440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07266 2 105 B3 DNA Binding Superfamily AT4G03170 45.283 1.06e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07266 - - tpra:123915381 143.28