Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca3g07242 | ATGAAAATCCCTTGTTGCTCGGTTTGCCAAACGCGGTACAACGAGGAGGAGCGGGTTCCTCTTCTGCTTCAATGTGGCCACGGCTTCTGCAGAGAGTGCCTTTCTAGAATGTTCTCGGCTTCGCCGGACGCCACGCTCACCTGCCCCCGCTGCCGCCACGTGTCCACCGTCGGCAACTCCGTTCAGGCGCTGCGCAAGAACTACGCCGTGCTTGCGCTCATCCACTCCGCCGCCGACGCATCCTCCGGTGGCGGCGGTGGCAGAGCGTCAAATTTCGACTGCGACTGCACCGACGAGGAAGATGGCGACGGCGAGGAGGAGGACGACGACGACGGAGAGAAGCGGCGCCGGAACAGCCGTGGCTCGCAGACGTCGAGCTCCGGCGGTTGCGCGCCGGTGATCGAAGTCGGTGCGCACCAGGACCTGAAGCTGGTGAGGCGGATTGGGGAGGGGAGGAGGGCTGGCGTGGAGATGTGGACGGCGGTGATTGGCGGTGGGCGGTGCCGGCATCACGTGGCGGTGAAGAAGGTGGTGATGGCGGAGGGGATGGATTTGGATTGGATGCAAGGGAAGCTGGAGAATTTACGTAGGGCTTCGATGTGGTGTAGGAATGTGTGCACGTTCCATGGAGCAATGAAGGTGGAAGAGAGTTTGTGTATCGTGATGGATAGGTGTTATGGATCGGTTCAGTCTGAGATGCAGCGCAACGAGGGGAGGCTAACTTTGGAGCAAGTCCTAAGATATGGAGCAGACATTGCACGAGGGGTTGTCGAGCTTCATGCTGCAGGCGTTGTTTGTATGAATTTAAAACCTTCCAATCTACTTCTTGATGCAAATGGTCATGCTGTGGTTTCTGATTATGGACTTGCTACAATTCTGAAGAAGCCTTCCTGTTGGAAGGCTCGACCAGAGTGCGACTCCTCAAAGATCCATTCCTGTATGGAATGTATAATGCTCAGCCCACATTATACTGCACCAGAGGCATGGGAACCTGTGAAGAAGTCATTAAATTTGTTCTGGGATGATGGAATAGGTATATCTTCCGAATCAGATGCCTGGAGTTTTGGTTGTACATTGGTGGAGATGTGCACGGGTGCCATTCCTTGGGCTGGTTTAAGTGCAGAGGAAATCTATCGAGCAGTTGTTAAGGCAAAGAAACTGCCTCCACAATATGCCAGTGTGGTTGGTGGTGGAATTCCAAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAATTCAAGCCATCTAAAAGGCCTACTTTTAGTGCAATGTTAGCAATATTTCTCCGTCATTTACAGGAAATACCACGCAGCCAACCTGCAAGCCCTGATAATGACTTTGTTAAGGGCTCTGTTTCAAATGTGATGGAGCCATCCCCAGTACCTGAGTTAGAAGTTCCTCAGGAAAACCCAAACCATCTTCATCGACTTGTGTCTGAAGGGGATGTCACGGGTGTTAGAGACCTTCTAGCAAAGGCTGCATCAGAAAATGGTAGCAACTACATATCTTCTCTATTGGAAGCTCAAAATGCTGATGGGCAAACGGCTCTCCACTTAGCTTGTAGACGTGGCAGTGCAGAACTTGTTGAAACAATTCTAGGGTATGGAGAGGCAAATGTTGATGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCCTTAGCGGCTGGGTCCCCTGAATGCGTTCGTAGCCTTATCAAAAGAAATGCTAATGTGAGGTCGCGATTGAGAGATGGCTTTGGCCCATCAGTAGCTCACGTTTGTGCCTATCATGGCCAACCAGATTGTATGCGAGAATTAGTATTAGCTGGAGCTGATCCTAATGCAGTGGATGATGAAGGTGAATCTGTACTGCACAGGGCAGTTGCCAAGAAGTACACAGACTGTGCTCTTGTGATAGTGGAAAATGGAGGCTGTAGATCAATGGCCATCTTGAATTCAAAGAATTTGACGCCACTGCACTTGTGTGTGGCAACTTGGAATGTTGCTGTTGTGAAGAGATGGGTGGAAGTCGCAACTGCTGATGAGATTGCTGAAGCAATTGACATACCAAGCCCTATTGGCACTGCCTTGTGCATGGCAGCTGCTTCTAAAAAAGACCATGAAAGTGAGGGCAGAGAACTGGTGCGAATATTGCTTGCAGCAGGAGCTGATCCATCCGCACAAGATTCACAGAATGGGAGGACAGCTTTGCATACAGCTGCTATGACTAACGATGTGGACCTGGTTAAGGTTATTCTTGCTGCTGGCGTTGATGTGAACATTCGGAATGTGCACAACAGTATACCTCTTCACTTGGCCTTAGCTAGGGGTGCAAAGGCATGTGTTGGACTGCTTCTAGCTGCTGGGGCAGATTACAATTTGCAGGATGATGATGGTGACAATGCTTTCCATATAGCAGCAGAAACGGCAAAAATGATACGTGAAAATCTTGACTGGCTTATTGTTATGCTAAAGAATCCTGATGCTGATATTGAAGTCAGAAACCACAGTGGCAAGACACTACGTGACATCTTAGAGGCTCTCCCTCGAGAATGGATATCCGAAGATCTGATGGAGGCACTCATGAATAGGGGAGTTCATTTGTCTCCTACAATATTTGAAGTGGGAGACTGGGTGAAATTTAAAAGAACTGTCATAACTCCAACATATGGGTGGCAAGGTGCTAGGCCAAAGAGTGTTGGCTTTGTGCAAAGTGTTCCAGACAGAGATAATCTCATCGTTTCATTTTGTTCGGGAGAAGTTCATGTTCTGGCAAATGAGGTTATAAAAGTCATTCCATTGGACAGGGGACAACATGTACAACTGAAAGAAGATGTAAAAGAGCCCAAGTTTGGTTGGCGTGGGCAGTCGCGGGACAGCATTGGAACAGTATTATGTGTTGATGATGATGGAATCCTCCGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGGAACGAGTTGAGGAATTCAAGGTTGGGGACTGGGTTCGTATTCGTCCAACTCTTACATCTGCAAAGCATGGATTAGGATCTGTGACACCAGGAAGCATTGGCATTGTATATTGTATCCGACCAGACAGTAGTCTGTTAATAGAACTGAGCTATCTTCCAAATCCATGGCATTGTGAACCAGAGGAGGTTGAGCATGTTGCTCCTTTTAGGATTGGTGATCGGGTATGTGTGAAGCGATCCGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGAATAAGTGAGATTGAGAATGATGGTCTCTTAATAATAGATATACCAAATCGACCCATACCATGGCAGGCTGATGCATCTGATATGGAGAAGGTGGAAGATTTTAAGCAGGTTGGAGATTGGGTCAGAGTGAAAGCTTCAGTGTCTTCTCCAAAATATGGATGGGAGGATATTACAAGGAACAGTATTGGAGTAATTCATAGCTTGGAGGAGGATGGTGATATGGGTGTTGCCTTTTGCTTCAGAAGTAAGCCTTTTTCTTGCTCAGTCACTGATGTGGAGAAAGTTCCCCCTTTTGAGGTGGGTCAAGAAATTCATGTGATGCCATCTGTTACTCAGCCACGGCTTGGGTGGTCAAATGAATCACCAGCTACTGTTGGAAAAATAGTGAGAATTGACATGGATGGTGCTCTCAATGTGAGGGTCACTGGTAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACGACTTCCAGGATTTGAAGTTGGGGATTGGGTACGCTCAAAACCAAGCCTCGGAAACAGACCAAGTTATGACTGGACTAGTGTTGGGAGAGAAAGTTTAGCTGTTGTGCATAGTGTACAGGATTCTGGATACTTGGAGTTGGCTTGCTGTTTCCGTAAAGGGAAGTGGATCACTCATTATACGGATGTTGAAAAGGTTCCTAGCTTTAAAGTCGGACAGTATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCTCAAGGGATTATAACCAGTATTCATGCTGATGGAGAAGTCAGGGTTGCATTCTTTGGTTTGCCAGGACTCTGGAGAGGAGATCCGTCAGACCTGCAGATTGAGCAAATCTTTGAAGTGGGAGAGTGGGTGAGATTGAAAGATAATGCAAATAATTGGAAATCAATTGGGCCAGATAGTGTTGGGGTCGTTCAAGGAATAGCTTATGAAGGAGATGAATTGGACAGAAGCATTTTTGTTGGCTTTTGTGGGGAGCAAGAAAAGTGGGTAGGACCAAGTTCCCATCTTGAAAGAGTTGACAAACTCGTTGTTGGACAAAAGGTTAGAGTTAAACAATATGTAAAACAACCAAGATTTGGTTGGTCAGGGCATACCCATGCTAGTATTGGGACTATACAAGCAATTGATGCTGATGGAAAGCTTCGAATATACACTCCTGCAGGTTCAAAAGCATGGATGTTGGACCCATCTGAAGTGGAGGTGGTGGAAGAGAAGGAGCTCTGTATTGGAGACTGGGTAAGGGTTAGAGCATCAGTTTCAACCCCAACCCATCATTGGGGAGAAGTGAGTCATTCAAGCATTGGGGTGGTGCATCGGATGGAAGATGAGGATCTGTGGGTAGCATTCTGTTTTATGGAGAGGCTATGGCTCTGTAAGGCATGGGAAATGGAACGGATCAGGCCATTTAAAGTGGGGGACAAGGTAAGGATCAGAGATGGACTGGTCGCCCCACGGTGGGGATGGGGAATGGAGACACATGCCAGCAAAGGACAGGTGGTAGGGGTAGATGCAAATGGCAAACTAAGAATAAGGTTCCGATGGAGGGAAGGGAGGCCCTGGATAGGAGACCCTGCTGATCTTGCCCTTGATGAGAACTGA | 4881 | 0.4792 | MKIPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASPDATLTCPRCRHVSTVGNSVQALRKNYAVLALIHSAADASSGGGGGRASNFDCDCTDEEDGDGEEEDDDDGEKRRRNSRGSQTSSSGGCAPVIEVGAHQDLKLVRRIGEGRRAGVEMWTAVIGGGRCRHHVAVKKVVMAEGMDLDWMQGKLENLRRASMWCRNVCTFHGAMKVEESLCIVMDRCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVVCMNLKPSNLLLDANGHAVVSDYGLATILKKPSCWKARPECDSSKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDGIGISSESDAWSFGCTLVEMCTGAIPWAGLSAEEIYRAVVKAKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFSAMLAIFLRHLQEIPRSQPASPDNDFVKGSVSNVMEPSPVPELEVPQENPNHLHRLVSEGDVTGVRDLLAKAASENGSNYISSLLEAQNADGQTALHLACRRGSAELVETILGYGEANVDVLDKDGDPPLVFALAAGSPECVRSLIKRNANVRSRLRDGFGPSVAHVCAYHGQPDCMRELVLAGADPNAVDDEGESVLHRAVAKKYTDCALVIVENGGCRSMAILNSKNLTPLHLCVATWNVAVVKRWVEVATADEIAEAIDIPSPIGTALCMAAASKKDHESEGRELVRILLAAGADPSAQDSQNGRTALHTAAMTNDVDLVKVILAAGVDVNIRNVHNSIPLHLALARGAKACVGLLLAAGADYNLQDDDGDNAFHIAAETAKMIRENLDWLIVMLKNPDADIEVRNHSGKTLRDILEALPREWISEDLMEALMNRGVHLSPTIFEVGDWVKFKRTVITPTYGWQGARPKSVGFVQSVPDRDNLIVSFCSGEVHVLANEVIKVIPLDRGQHVQLKEDVKEPKFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADASDMEKVEDFKQVGDWVRVKASVSSPKYGWEDITRNSIGVIHSLEEDGDMGVAFCFRSKPFSCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSNESPATVGKIVRIDMDGALNVRVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGNRPSYDWTSVGRESLAVVHSVQDSGYLELACCFRKGKWITHYTDVEKVPSFKVGQYVRFRTGLVEPRWGWRGAQPESQGIITSIHADGEVRVAFFGLPGLWRGDPSDLQIEQIFEVGEWVRLKDNANNWKSIGPDSVGVVQGIAYEGDELDRSIFVGFCGEQEKWVGPSSHLERVDKLVVGQKVRVKQYVKQPRFGWSGHTHASIGTIQAIDADGKLRIYTPAGSKAWMLDPSEVEVVEEKELCIGDWVRVRASVSTPTHHWGEVSHSSIGVVHRMEDEDLWVAFCFMERLWLCKAWEMERIRPFKVGDKVRIRDGLVAPRWGWGMETHASKGQVVGVDANGKLRIRFRWREGRPWIGDPADLALDEN. | 1627 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca3g07242 | 1626 | Pfam | Ankyrin repeats (many copies) | 584 | 631 | IPR002110 | GO:0005515 | |
| Seca3g07242 | 1626 | SUPERFAMILY | RING/U-box | 5 | 58 | - | - | |
| Seca3g07242 | 1626 | Gene3D | - | 450 | 642 | IPR036770 | - | |
| Seca3g07242 | 1626 | ProSiteProfiles | Ankyrin repeat profile. | 546 | 578 | IPR002110 | GO:0005515 | |
| Seca3g07242 | 1626 | FunFam | E3 ubiquitin-protein ligase KEG | 226 | 442 | - | - | |
| Seca3g07242 | 1626 | SMART | ANK_2a | 512 | 542 | IPR002110 | GO:0005515 | |
| Seca3g07242 | 1626 | SMART | ANK_2a | 727 | 756 | IPR002110 | GO:0005515 | |
| Seca3g07242 | 1626 | SMART | ANK_2a | 614 | 645 | IPR002110 | GO:0005515 | |
| Seca3g07242 | 1626 | SMART | ANK_2a | 687 | 722 | IPR002110 | GO:0005515 | |
| Seca3g07242 | 1626 | SMART | ANK_2a | 649 | 680 | IPR002110 | GO:0005515 |
Showing 1 to 10 of 49 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca3g07242 | K16279 | - | gmx:100777576 | 3092.37 |
Showing 1 to 1 of 1 entries