Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07219 ATGCAAACCTTTCTTCCTATCCACTATTTGGAACCTCTGGAAAGTGAAGATTGTTGGTCTTTACTTGCCAAACATGCATTTGGAGCAAGCAACTATCAACAACGGTCCAACTTAGAAGTGATTGGCAGAGAAATTGCCAACAAATGTGATGGCTTACCATTAGCTGCAGTAGCACTTGGGGGTCTTCTTCGCACCAAATTTTTGCAAGAGGATTGGAACAAGGTATTAAAAAGTAACATTTGGGATTTGCCAAATGTTGAGGTGCAACCAGCTCTGCTCCTGAGCTATCATTATCTTCCGGCTCCTTTAAAACAATGTTTTTCCTATTGTTCAATTTTTCCGAAGAATTCTGAGTTAGAGAAAAAGATGGTAGTTCAGTTGTGGATTGCAGAAGGCTTGGTACATGAGTCCAGAAATCAGAAAAGTTGGGAAGAATTAGGAGAAGAATACTTTGATGAATTGGTGTCAAGGTCGCTCATACTTCGTTTGACTGTTGACGGGGAAGAAAGCTTTGTAATGCATGATCTCATCAATGACTTAGCTACAATGGTTTCATCTCCTTATTGTATCAGGTTGGATGAACACAAGTCGCATTATAATAGAGGGAGATATGACTCATACAATAAATTTGATAAATTGTATGGATTAAAAGGTCTACGTACCTTCCTACCCTTACCATTACAACTAGACGGGTTGTTTCTTTTGTTCTCACCCTGTTACCTATCAAACAAGGTAGTGCATGATGTGTTGCTAGCAATGAAACAGTTACGGGTGTTGTCTTTGTCACACTACCCTAATATCACTGAGTTGCCCAACTCTATTGGAAATTTGAAATACCTACGATACTTAAATCTCTCTTCCACTGCGATTAAAAAGTTGCCTTCAGTAATATGCAAGCTTTACAATCTGCAGACCTTATTGTTGTCCGATTGTTGGAAACTCACTGAATTGCCCGAGGACATGGGAAAATTGGTCAATCTACGCCACCTTGACATTAGTGACACTAAATTGAAGGAGTTTCCGGTACAAATAACAACATTACAAAATTTGCAAAGCTTGTCTGATTTTATTGTCAGCGAACAACATGATGGAGTGAAGGTTGCAGATCTGGGAAAATTTCGTCATCTACATGGGAAGCTTTCCATCTCACAGCTACAAAATGTTGCCAACACCTCCGATGCTTCTCAAGCAAATTTGAAGATGAAAGAACAAATTGACAAGTTGGAACTAACATGGCATGGGAATGACTCTGGTTTGCAAATTCAAAGTCTTGTACTTGAACAGTTGCGACCCTCAACAAATTTGAAGAGTCTCTCTATCAGAGGCTTTCATGGAACTAGCTTTCCAAATTGGTTGGGTGATTCTTCATTTGGCAACATGGTGTCTTTGATTATAGCTAAATGTGATAATTGTTCATGGCTGCCACCCCTTGGACAATTGCATAGCCTGAAAAAGCTCTCTATTTCTGGGATGAAATCTGTGAAGACTGTGGGTGCTGAATTCTATGGAAGTAGTGCTCCTTCATTTCAACCATTTCCCTCTTTGGAGACTCTCTCTTTTAGTGATATGCCGGAGTGGGAGGAATGGAAGTTAATTGGAGGTACAGTTACAGAGTTTCCTAGTCTAAGACTTCTGTCATTGGCAAATTGTCTGAAACTCAAAGGAAACATTCCCACCAATCTTCCTTCCTTAACTGAACTTAGTATAATGGAGTCAGGGCATTCAGATGATAATGATAATAGCAACACCAACATCATAAGATTGATGCTGCCTCTGCATTCTCTTCGGAAGTTAACGATATCTGACTGTCCCTCTCTGACTTCCTTCCCAAGAGATGGTCTACCAAAAACCTTACAATCTCTCTATCTCTATGACTGTGACAATCTGGAATTCCTTCCCTGTGAATCCTTCCACAACTACACATCACTTGAGGAATTAACAATAGTAGATAGCTGTAATTCAATGACATCCTTTACCTTGGGCTCTCTCCCCGTGCTCAAAAGTCTTTGTCTCTCTCGTTGTGAAAATCTTAAATCGATTTTCATTGTAGAAGATGCATCCCAGAGTCTCTCCTTTCTTCAAAGTATCAAAATATATGACTGTGGTGAACTTGAGTCATTTTCTCCGGGTGGATTGCCCACTCCTAACCTCATTTATTTCACGGTGTCTCGTTGTAAAAAGCTTCTTTCACTACCAGAACCAATGAACGCTTTCTCTGGCCTTCATGAAATGGAAATCAGTGACCTTCCAAATCTGCAATCTTTTGCCAAAGAGGGTTTGCCTATCAATTTACAGAAACTAACTATCAGCAAGAGGCTGGGGAGCTATCAAGTCAGTGAGTGGAGTTTGGGACGTCTCACCTGTCTTTCTAAGTTACGACTTGAAGGTGACGATATCGTGAATGTACTGATGAAAATGGAAGTGCCATTGCTACCGGATTCAATTGTGTCCCTAACTATCTCTAGTCTTGATGATATAAAATGCTTGGATGGGAAGTGGCTTCACCATCTCACCTCTCTCCAAACCCTTAAGATTTCAGATTCTCCCAATCTCAAGTCGTTGCCAGAAGAGGGATTGCCTTCCTCTCTCCAAACTCTGAAGATATATGAGTGCCCATTACTGAAAGCAACAAGTTGGCAGAGGAAGCAAGGGAAAGAATGGGCTAAAATTGCTCGCATTCCCACCATAGTTATCGACTTGAAAATGATCACATGA 2715 0.4052 MQTFLPIHYLEPLESEDCWSLLAKHAFGASNYQQRSNLEVIGREIANKCDGLPLAAVALGGLLRTKFLQEDWNKVLKSNIWDLPNVEVQPALLLSYHYLPAPLKQCFSYCSIFPKNSELEKKMVVQLWIAEGLVHESRNQKSWEELGEEYFDELVSRSLILRLTVDGEESFVMHDLINDLATMVSSPYCIRLDEHKSHYNRGRYDSYNKFDKLYGLKGLRTFLPLPLQLDGLFLLFSPCYLSNKVVHDVLLAMKQLRVLSLSHYPNITELPNSIGNLKYLRYLNLSSTAIKKLPSVICKLYNLQTLLLSDCWKLTELPEDMGKLVNLRHLDISDTKLKEFPVQITTLQNLQSLSDFIVSEQHDGVKVADLGKFRHLHGKLSISQLQNVANTSDASQANLKMKEQIDKLELTWHGNDSGLQIQSLVLEQLRPSTNLKSLSIRGFHGTSFPNWLGDSSFGNMVSLIIAKCDNCSWLPPLGQLHSLKKLSISGMKSVKTVGAEFYGSSAPSFQPFPSLETLSFSDMPEWEEWKLIGGTVTEFPSLRLLSLANCLKLKGNIPTNLPSLTELSIMESGHSDDNDNSNTNIIRLMLPLHSLRKLTISDCPSLTSFPRDGLPKTLQSLYLYDCDNLEFLPCESFHNYTSLEELTIVDSCNSMTSFTLGSLPVLKSLCLSRCENLKSIFIVEDASQSLSFLQSIKIYDCGELESFSPGGLPTPNLIYFTVSRCKKLLSLPEPMNAFSGLHEMEISDLPNLQSFAKEGLPINLQKLTISKRLGSYQVSEWSLGRLTCLSKLRLEGDDIVNVLMKMEVPLLPDSIVSLTISSLDDIKCLDGKWLHHLTSLQTLKISDSPNLKSLPEEGLPSSLQTLKIYECPLLKATSWQRKQGKEWAKIARIPTIVIDLKMIT. 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07219 904 Gene3D Ribonuclease Inhibitor 233 575 IPR032675 -
Seca3g07219 904 Gene3D - 12 94 IPR042197 -
Seca3g07219 904 SUPERFAMILY L domain-like 581 879 - -
Seca3g07219 904 Gene3D - 95 183 IPR036388 -
Seca3g07219 904 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 617 873 - -
Seca3g07219 904 Pfam NB-ARC domain 8 77 IPR002182 GO:0043531
Seca3g07219 904 FunFam Probable disease resistance protein At1g63360 96 183 - -
Seca3g07219 904 Gene3D Ribonuclease Inhibitor 614 759 IPR032675 -
Seca3g07219 904 Gene3D Ribonuclease Inhibitor 760 886 IPR032675 -
Seca3g07219 904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 110 IPR027417 -
Seca3g07219 904 SUPERFAMILY L domain-like 169 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07219 Seca-Chr3 170976599 170979364 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07219 267 353 WRKY Transcription Factor Family AT4G12020 43.182 2.66e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07219 - - tpra:123916222 1162.9