Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07206 ATGCACTATGACTTTCTTAATCTTGAAGTGGCATATTGTTTCTACAAGAATTATGCTAGAGCTAATGGGTTTCCAGTAAGAAAGGGTAGCAAACTTAGAAACTCGAAAGGTGAAATAACACAACAGGCTTTTCTATGTAACAAGGCAGGGTTCAGAGAGGATAGAGGGTTAAGAGATGAAGATCGTCAAAGGGAAGAAAAGCCACATACTCGATGTGGGTGTCGTGCGGAGTTTCGTGTTCATGTTGACAACAATTCTGGTCGTTGGGAGGTACGATTGTTCAGAGATATGCACAATCATGACCTTGTTCTTGAACAGTTGTGTGGTTTGATACCAGGACACAGGAAGATGTCTGAGGCAGATATTTTACAGATGAACAATTTGCAAAATGTTGGCATTACCATCCCGGACATCTATGGAGCATTTGCTAGTCAGGTAGGAGGATACTTGAAAGTCGGGTTTCGTAAGAAAGACATGTACAATGAGGCGGCCCGACAACGCAGGTCAAATAAATCTGACGTGGCTGCAACATTGGAATACATATGGACGTTTGGTTTGCATGACCAATTACTATTTGTTCGGCACAGTTGTGATGCGGAGGGGAGACTGGAGTGA 615 0.4293 MHYDFLNLEVAYCFYKNYARANGFPVRKGSKLRNSKGEITQQAFLCNKAGFREDRGLRDEDRQREEKPHTRCGCRAEFRVHVDNNSGRWEVRLFRDMHNHDLVLEQLCGLIPGHRKMSEADILQMNNLQNVGITIPDIYGAFASQVGGYLKVGFRKKDMYNEAARQRRSNKSDVAATLEYIWTFGLHDQLLFVRHSCDAEGRLE. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07206 204 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 172 - -
Seca3g07206 204 Pfam FAR1 DNA-binding domain 14 103 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07206 Seca-Chr3 170649095 170649709 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g07206 FAR1 5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07206 - - mtr:112420123 214.542