Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07169 TCGTTGTCTTCCCTAAGGCCGATCGTTTCTGGCTTTGTGCACTCCCTCTTCGTCTTCTCCGATCGTGTCTGGATCTGCAGAACTCGGGCCGCCACGCGATCTCCTTCTTCTCCGATACCTTCTCAGATTGAGTTTGGCATTAAAATGCCGGATGTTCAGACAATTGTTAATGATTTTGTGAATCAGCTTAAGAAACGTAAGATTGAAGGTTCTCAGGCCACAGCAAAACAGACAGCGGAGTTGCTCCGGTCTGTGATTTCACAGCAGCGGGTGCCACAGACAAACCAGGCTACAGCACTGATTAATGCAGTAAGGGCTGTGGGAGAGAAGCTTATTGCTGCTAATCCTGTTGAGCTAGCTGTGGGAAACATTGTGAGGCGTGTTTTGCACATTATAAGGGAGGAGGATCTTTCCCTTGCCACAGCTGCTATAGCTGGTTTGGGGTTATCAGCTGCAAGTGATGACGAAGATGATGTGGAGCGAGATGATCATCCTGTTTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCGCCATCATTGCAAACTCTTCTAGAGGATACACCTGATTCAGCTGCTGTTCCGCTCACATCTTCCTCAGGGGGTGAATCTGAAGGGAAAAGTAGATGTGAGGATGGCATGAGCTGTTGA 663 0.4902 SLSSLRPIVSGFVHSLFVFSDRVWICRTRAATRSPSSPIPSQIEFGIKMPDVQTIVNDFVNQLKKRKIEGSQATAKQTAELLRSVISQQRVPQTNQATALINAVRAVGEKLIAANPVELAVGNIVRRVLHIIREEDLSLATAAIAGLGLSAASDDEDDVERDDHPVLSAAAVAAAARSTLRPPSLQTLLEDTPDSAAVPLTSSSGGESEGKSRCEDGMSC. 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07169 220 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 50 215 - -
Seca3g07169 220 Pfam Initiation factor 2 subunit family 67 142 IPR000649 GO:0044237
Seca3g07169 220 MobiDBLite consensus disorder prediction 186 208 - -
Seca3g07169 220 SUPERFAMILY NagB/RpiA/CoA transferase-like 51 154 IPR037171 -
Seca3g07169 220 MobiDBLite consensus disorder prediction 186 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07169 Seca-Chr3 169638089 169641682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07169 49 207 Eukaryotic Initiation Factors Gene Family AT3G07300 72.671 7.50e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07169 K03754 - rcu:8270898 254.603