Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07168 ATGATTTTCAGTGAGGTAATATTAACACTAGGAAGTTCAAAGACAGTGTTGGAATTTCTTTATGCTGCGAAGGAAAAAAAGAGATCATTTAAGGTCTTTGTCGCCGAAGGTGCCCCAAGATATCAGGGACATCTCCTTGCAAAAGAATTGGCTGCTAGAGGCTTACAGACCACAGTAATTACTGATTCTGCAGTTTTTGCCATGATTTCCCGAGTGAACATGGTTATAGTTGGAGCTCATACTGTCATGGCTAATGGTGGAGTTATTGCCCCAGTTGGGTTAAATATGGTTGCACTTGCAGCTCAAAGGCACGCTGTTCCTTTTGTTGTACTTGCGGGGAGTCACAAGTTGTGCCCTTTGTATCCTCACAATCCTGAAGTCCTACTGAATGAGCTGAGATCTCCGTCTGAGCTACTTGACTTTGGAGAATTCTCAGATTGCATGGATTCTGCAAGTGGTGCTGGAACTCTTCACGTCGTCAATCCAACATTTGATTATGTGCCACCAAAACTTGTTAGTCTGTTTATTACTGACACAGGAGGGCATAACCCATCATATATGTACCGTCTTATAGCCGATTATTATTCAGCTGATGATTTGGTGGTGAAACGAAGACCGGCTACAGGGAGTTGA 633 0.4313 MIFSEVILTLGSSKTVLEFLYAAKEKKRSFKVFVAEGAPRYQGHLLAKELAARGLQTTVITDSAVFAMISRVNMVIVGAHTVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGAGTLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKRRPATGS. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07168 210 Gene3D - 3 194 IPR042529 -
Seca3g07168 210 FunFam translation initiation factor eIF-2B subunit beta 2 195 - -
Seca3g07168 210 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 4 201 - -
Seca3g07168 210 Pfam Initiation factor 2 subunit family 5 184 IPR000649 GO:0044237
Seca3g07168 210 SUPERFAMILY NagB/RpiA/CoA transferase-like 5 199 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07168 Seca-Chr3 169629502 169631814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07168 4 202 Eukaryotic Initiation Factors Gene Family AT3G07300 89.950 3.05e-133 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07168 K03754 - gmx:100778545 402.519