Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07140 ATGGAAATCAAAGCAAAAAAAGATGGAATTCTAACTTTAAGAAGGTTCGCATGCTTCAAAGAGGGTAAACGTGGCGTTGACAAACGAGACCATTTGACAAAAGAGCCTAGAGCAGAAACTAGAATAGGTTGTGAAGCAAACATGGTTATTTCACTTGATCGAAAGATTGGGAAATACAATGTTATTGACTTTGTAGCTCAACATAATCATCCTCTTCAACCGCCAGAATATGTTCATATGATTCCCTCCCATCGACACATATCTGAGTCACAAGAATCACAAATTGTATTGGCAGATGAATCTGGATTGAAACCAAAAGATTTTCATGAATATGTGTCCAAACATGTTGGTGTCCAGTTGTCACAGTAA 369 0.374 MEIKAKKDGILTLRRFACFKEGKRGVDKRDHLTKEPRAETRIGCEANMVISLDRKIGKYNVIDFVAQHNHPLQPPEYVHMIPSHRHISESQESQIVLADESGLKPKDFHEYVSKHVGVQLSQ. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07140 122 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 111 - -
Seca3g07140 122 Pfam FAR1 DNA-binding domain 5 74 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07140 Seca-Chr3 169009829 169010197 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g07140 FAR1 1.9e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07140 - - tpra:123896263 190.66