Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07104 ATGGTTCAAAGAAAGGTACCTAGCAAGCTTGGTATCCAAGCTGAACATGTTAAATCAGATAAACACTTGGCAAACCTGAAACTATCTTCTTCTCAGCACCAAGATGGCAAAAATAGAGGAGCTGATATGAAGAAAAAGATGAGGAAATCAAGGTCAATCAAGCTTTCTGATCTTGAAACTCTTCAATCATCATCATCACCTTCAAGGAGAAGCTTATCCCAACCAGGAAAACCACCACCACCTCTTCATGTTCCAACAACTTCAGCATCAGCTTCCCCACAGAAGCAGCATCATCCTTTGATGAGAACACCAGATGGTTCACCCAATTACATGAAGCCCACAAGCAGTTCACATGCAAAAAAGGAACTTTTCCCGGTGAGTCATAGGAACACTCAATCTGGTTCTGATTTTAAGAATCTACCAAGAAAATTTTCTAGTGATTCAAAAGCTACCTGTGTTTCTAGTAAAAAACCAGCAAAAGCTAGTTTGAGTTTGGTGAGAACATTAACAAAGACTACTAGTTTCAAGGCTTCTAGAGCATGTCCTAAAAAATCCACCAGGGCTGCTATGTGTGCTGCAGATATAAAGAATGCACCACATAGAGCTACTTGTTCTTCAACTTTGAAAGACTCAAAGTTCCCTGCATACCTCATGCTTAATCCTGGTGGAACTGAATCAGAGGGAACTTCAATGATGAAGGTTTGCCCATATACATATTGTTCTCTTAATGGCCATCATCATGCTGATTTGCCTCCATTGAAGAGCTTCATTTCTTCAAAGAGGCGCCTTTTGAAGACCCAGAAGCGAATGAAGGTGGAAGCTTTGAGCCCTCGAAGATTGAAGGTTCCCCATGAGACAAAGAAGAAGGACTCTGATATTGAGCAGAGTGTCCGTGATACAAAACCTACTGCATATGATGAAATTGACATGGATATCTTCATTGAAATCTATGCTAATGAAAAGGATGCAAAACCAACAGCAGAAGAAGAAATGGGAAAATTAGATTTTCTCAAAGAAATTGAGGATCAAGAAGATGTCATTGTCAAGCCTACAATTGAGGATAAGAGTGTCACTATCAAGCAAGTTATTCCAAGCATTGCTGATACTCCTTCTCCTCATGAATCTCAGATTGAACTTGAGGAAGATTTGGAAACTTCCTTTGATGATGTTGCTGTTGAAGCAGATACCAAGGGAAGCTTTCTCCAAGAGCAAAATGCAGAAGAAGACCCCCAACCTAGCTGGTCTCATGAAGAAATGAGTATAGGAAGCTACTGCAGTGATGAGGAACACATGGATGATTCTGATTCCAAAGCAGATAGTATGGAGTGGGAAGAGGAACAGTTTTATGGATTTGACCCTAAAGAGGTTGCTGATTCAAAAATTGAGACCTTATCAGAGAGTTCTCATGATATGTCAGTGACATGGTTAGATGATATCCTTAGTACCTATTATGAGGGCATTCTGGTTGATGAAATGCTCAAAGAAGCCAAATTAAAGGAAACCCCTTTATTTGAAGAACAACCTCATGATGGCATTAGTTCTGTCATTGAAGACATAAGTGGAGGCAATGAGACCCAAGAAACTGGTTACCCCTCCAGTGACATGGTTTGTGACCAATCTTCTTTGACAGAGGAAGTATTTGAGTATCTGACAAATGCAGAGGAAAATGGTGGAGAAAATGAAGAATTGGCCAATTGCAACATGGAGGCACTTGATGACAATAGGCAATACCAAGAGGTGAATGAAACTTGCAAGATTGATGAGACAAACGAAGATAGATCCTCAAGCCAAGAGAACAATGATGACAACAGTAATAGTGAGGAGAATCAAATTCACTTGTTGGATGAAGAAAGCAACATCACAGGTGTTCAAGATCAAGGCAAAGGTAATAAGTTCCAGAGGAGAAGTTGCATGGGTGGTGAAGAGCAAAACACAGGGGAGAATTGGAAAATTGCAATTGGAAGAAAGAGGCAGGTTGAAGAAGATGATGATGAAATGAGAAAGTTAAACCCAAAAGATCCAAATTACTTGCCTTTGGTTCCTGAACCAGAAGCTGAAAAGGTTGATCTGAGGCATCAAATGATGGATGAGAGAAAGAATGCAGAGGAATGGATGCTTGATTGTGCACTTAGACAAGTTGTCACAAAACTTGCTCCAGCTAGGAAGAAGAAGGTGGCACTGCTAGTTGAAGCCTTTGAAACGGTAATGCCAATACCAAAATGTGATACTCATTTGAGAAACAATTCAGCCTTTGCTCATTCAAGACATATTCAAGCTTGTAGCTGA 2286 0.4024 MVQRKVPSKLGIQAEHVKSDKHLANLKLSSSQHQDGKNRGADMKKKMRKSRSIKLSDLETLQSSSSPSRRSLSQPGKPPPPLHVPTTSASASPQKQHHPLMRTPDGSPNYMKPTSSSHAKKELFPVSHRNTQSGSDFKNLPRKFSSDSKATCVSSKKPAKASLSLVRTLTKTTSFKASRACPKKSTRAAMCAADIKNAPHRATCSSTLKDSKFPAYLMLNPGGTESEGTSMMKVCPYTYCSLNGHHHADLPPLKSFISSKRRLLKTQKRMKVEALSPRRLKVPHETKKKDSDIEQSVRDTKPTAYDEIDMDIFIEIYANEKDAKPTAEEEMGKLDFLKEIEDQEDVIVKPTIEDKSVTIKQVIPSIADTPSPHESQIELEEDLETSFDDVAVEADTKGSFLQEQNAEEDPQPSWSHEEMSIGSYCSDEEHMDDSDSKADSMEWEEEQFYGFDPKEVADSKIETLSESSHDMSVTWLDDILSTYYEGILVDEMLKEAKLKETPLFEEQPHDGISSVIEDISGGNETQETGYPSSDMVCDQSSLTEEVFEYLTNAEENGGENEELANCNMEALDDNRQYQEVNETCKIDETNEDRSSSQENNDDNSNSEENQIHLLDEESNITGVQDQGKGNKFQRRSCMGGEEQNTGENWKIAIGRKRQVEEDDDEMRKLNPKDPNYLPLVPEPEAEKVDLRHQMMDERKNAEEWMLDCALRQVVTKLAPARKKKVALLVEAFETVMPIPKCDTHLRNNSAFAHSRHIQACS. 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07104 761 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 737 IPR044681 GO:0005516
Seca3g07104 761 MobiDBLite consensus disorder prediction 657 680 - -
Seca3g07104 761 Pfam Plant calmodulin-binding domain 631 737 IPR012417 GO:0005516
Seca3g07104 761 MobiDBLite consensus disorder prediction 126 152 - -
Seca3g07104 761 MobiDBLite consensus disorder prediction 615 643 - -
Seca3g07104 761 MobiDBLite consensus disorder prediction 56 72 - -
Seca3g07104 761 SMART CaM_binding_2 626 737 IPR012417 GO:0005516
Seca3g07104 761 MobiDBLite consensus disorder prediction 586 645 - -
Seca3g07104 761 MobiDBLite consensus disorder prediction 397 419 - -
Seca3g07104 761 MobiDBLite consensus disorder prediction 657 671 - -
Seca3g07104 761 MobiDBLite consensus disorder prediction 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07104 Seca-Chr3 167953859 167958012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07104 641 761 Calmodulin-binding Proteins AT2G38800 52.459 4.34e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07104 - - gmx:102660315 934.48