Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07094 ATGTCGTCAGAGCAAGGCATGGCAAGGGATCAGGAGAACCAAATAGAGGATAGGACGAAGAAGCCAAAGGTTCCTTTTCTCAAGCTCTTCTCATTTGCTGACTTCCATGACTATCTCTTGATGGCTCTTGGATCTCTTGGAGCGTGTGTTCATGGTGCTTCTGTTCCTGTTTTCTTTATCTTCTTTGGGAAGATAATCAACGTCATTGGCTTGGCTTACCTTTTTCCCAAACAAGCTTCACACCAAGTTGCCAAGTATGCGTTGGATTTTGTTTATCTAAGTATAATAATACTGTTTTCATCCTGGGCAGAGGTGGCTTGTTGGATGCATACTGGGGAACGCCAAGCAGCAAAGATGAGGATGGCATATTTAAGGTCAGTGTTGAATCAAGATATAAGTCTTTTTGACACACAAGCATCAACTGGAGAGGTCATTTCTTCTATTACAACTGACATCATCGCTGTTCAAGATGCACTATCCGAGAAGGTATGCATGCATTTTATTTATATTGTATGA 516 0.4147 MSSEQGMARDQENQIEDRTKKPKVPFLKLFSFADFHDYLLMALGSLGACVHGASVPVFFIFFGKIINVIGLAYLFPKQASHQVAKYALDFVYLSIIILFSSWAEVACWMHTGERQAAKMRMAYLRSVLNQDISLFDTQASTGEVISSITTDIIAVQDALSEKVCMHFIYIV. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07094 171 PANTHER ABC TRANSPORTER B FAMILY 10 167 IPR039421 -
Seca3g07094 171 SUPERFAMILY ABC transporter transmembrane region 29 170 IPR036640 GO:0005524|GO:0016020
Seca3g07094 171 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 42 171 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca3g07094 171 Pfam ABC transporter transmembrane region 45 170 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca3g07094 171 Gene3D ABC transporter type 1, transmembrane domain 19 171 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07094 Seca-Chr3 167745799 167747521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07094 1 169 Calmodulin-binding Proteins AT2G36910 43.605 6.90e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07094 K05658 - gmx:100809752 261.151