Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07077 ATGCTTGGTCATCTCGTTTCCATTGCAACGAAGGAGCTCCTCAATGGACAGAAAATGGTTCTGGTTCGTTGCGAGGAGATTTGCAATTCTGGTGGACGCGTAAGACAGAAGATGAAGTACATAGCGCATGGTCCCATCCACTTCCATGCTCATGCCAAGATCTTCTGA 168 0.4762 MLGHLVSIATKELLNGQKMVLVRCEEICNSGGRVRQKMKYIAHGPIHFHAHAKIF. 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07077 55 SUPERFAMILY Ribosomal protein L13 1 47 IPR036899 GO:0003735|GO:0005840|GO:0006412
Seca3g07077 55 Gene3D Ribosomal protein L13 1 54 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07077 Seca-Chr3 167261359 167261526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07077 1 55 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 63.636 2.87e-22 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07077 K02872 - rcu:8264955 82.4185