Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07055 ATGGGGAAAACAAAGAAAAAGTGCTCAACTTCAAGAACAGATTGTAAGGCATCACTAGTTGTTTCAAAAGCATGGAAGAGAAGTAAATGGATTATCAAAAGCTTTGATAATGTTCATAATCATGCCATGATTAGCCCTAAGAGTGTGGGCTATCTTCGATGTCATAAAAAAATGAGCATGGCGGCTAAAAACCTCGTTGAGAAGTTTGAAGAAGAAGGGGTGCCGACAGGAAAGGTTGCCACAATGTTTAATAATGGAGATATATCTTTCTCTAACAGGGATTGCTGGAATCATCTTAGAAAAGTTAGAAGAAGGAATCTTGATATTGGAGATGCCCAAGCTGTTCTAAACTTTTGTAAAGAAAATTGGATTCACATCATATACCATAAAAAATCAGCTTTCAAACGTGAATTGAAATTGTGCATTCGTGATTCACCATCTATAAAAGATTTTGAAAAAGATTGGGAGCGTATAATGGTTACTTATGACTTGAAAAAGAATGAATGGCTACAAGGTTTATACAATATAAGAGATTCATGGGTGCCTGTTTACAATAGGGGGACTTTTTTTGGTGGGATGAACACTACAAAAAGGAGTGAAAGTATGAATTCTTTTTTTATGCCTTTGTTAATTCTTCAACAACACTATGAGATTTTGTAG 660 0.3485 MGKTKKKCSTSRTDCKASLVVSKAWKRSKWIIKSFDNVHNHAMISPKSVGYLRCHKKMSMAAKNLVEKFEEEGVPTGKVATMFNNGDISFSNRDCWNHLRKVRRRNLDIGDAQAVLNFCKENWIHIIYHKKSAFKRELKLCIRDSPSIKDFEKDWERIMVTYDLKKNEWLQGLYNIRDSWVPVYNRGTFFGGMNTTKRSESMNSFFMPLLILQQHYEIL. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07055 219 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 127 216 IPR031052 GO:0006355
Seca3g07055 219 Pfam FAR1 DNA-binding domain 3 43 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07055 Seca-Chr3 167018940 167020748 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g07055 FAR1 3.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07055 - - mtr:112420966 260.381