Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07028 ATGGTTTTGGAAGTCGTTGGTGGAGCTTTTCTAGGTGCTGTTTTTAATGTGTTGCTTGATAAAATAGCTTCTCCAGAGGTTGTCAGCTTCTTGAAGGGGAAGAGACTGGACTACAGGTTACTAAAGAAGTTGAAGCTGCTTTTGTTGTCACTTAATGGAGTTCTTGATGATGCTGAAGGAAAGCAAATTACAAACGCTGCAGTGAAGGAATGGCTTGATGAACTTAAAGATGCTGCATATGAGGCTGATGGTCTACTGGATGAGATCTTTACTAGTGCTAAATATGGTGCGTGTGAGGTAAGGAACTTCGACTCTACTTGGAGTTCATATGATAAAGAACTAGAAGAAAACATGGAGGAGATCATTGATAAATTAGATTTTATTGCAAATCAGAAAGATGTCCTTGGTCTAACAGGGGGTGTAGGGGTCAAACTGTCTCAAAAAACTCCAACAACATCTTTAATTGAAGGATCTAATGTATATGGAAGAGATTATGATAAAGAATTTCTAATCAACCTACTATTTGATGTTGAAAGTGGTGATAACAAGATAGGAGTGATTCCAATAGTAGGTATGGCTGGAATTGGAAAGACCACCTTAGCTCAACTTGTATACAATGATGACACAGTGAAGGAAAACTTCGATCTCAGAGCTTGGGTTTGTGTTTCTGAAGAATTTGACATTTTTAAGATTACAGAAACTGTTTTGGAGATTCTTACTATGTGCAATTATGGAATTAGAAATCTAAACTCACTTCAACTTGAACTAAAGAAAAGGCTGATGGGAAAGAAATATTTATTTGTGCTGGATGATGTGTGGAACGAGAACTATGTTGATTGGGATATATTGAGAACTCTTTTTCAATATGGAGCTCATGGGAGTAAGATCATTGTTACCACACGAAGTGAGCATGTAGCATCAATAATGCAAACTATTCCATCATATCATTTGAGATACTTATCAGATGATGACTGTTGGATGTTGTTTGCAAAACATGCATTTGACTATAGAAACTCAAGAACTAATCGGCTTTTGGAAGAGATGGGTAAAGAAATTGCAAAAAGATGTAAGGGATTGCCTCTTGCAGCAAAGACATTGGGAGGTCTCTTACGCTCAAAAACAGACATCAAAGAGTGGGACAACATATTAAACAGTGACATATGGGAGTTTTCAGACACAATGAGCAATATTCTTCCAGCTCTGAGATTAAGTTACTATTATCTCCCATCACATTTAAAACGATGTTTTGCTTACTGTTCAATATTCCCTAAAGGCTATGAATTTGACAAGGAGGAGTTGGTATTGTTATGGATGGTAGAAAATTTACTTCAAGAACCAAGAAGGAATAAGAGAATTGAAGAAGTTGGAGATGAGTATTTTCATGAACTAGTGTCTTGGTCATTTTTCCAACAATCAAGAAATAACCAATCACTCTTTGTGATGCATGATCTTATAAATGACCTAGCTCAACATGTCTCTGGAAAATTTTGCGTCAGATTGGAGAACAACTCAAATGAAGATGCTGAGAAAAGAACTCGTCATTTGTCACAAGTTATTGCATGCAGATACCCCTCCATAAACTTTGAGGCTTTCCACAAAGCAAAGGGTTTGCGTACCTGTTTGCAACTAAGCTTGGTAGATCCACCCATATGCCTTTTCAACAAGGTGCCACATGATCTATTGACCAAATTAGGGTGTTTAAGGGTGTTATCATTGGTTGGTGCCCGTGGTAGCGTCAATGAGCTGCTCCTCTTCATCGGCAAGCTAAGACATCTAAGATACTTAGATGTGTCTCAAACTCAAATAAAAAAGTTGCCGAGTGCCATCTCTACTTTGTACAATTTACAAACATTGAAGGCAGTAAGGTGTCCTAATATCACACAATTGCCAAGAAATATGCATTGTCTTGTAAATTTAAGATATCTTGACATCACGGGTGCTCACTTAGAAGGGATGCCATTGCACATTAGTAAACTTAAAAGCCTGCAAAAGTTGAGCAATTTTGTTGTGGGCAAAGAACATGCTTCTTCCATTGCTGAATTAGGGGAACTGTCGCATCTAGGAGGTTCTTTGCATATCCAAAACTTAAAATATGTGGTTAATCCTAAAGATGCAATGAAGGCAAGGTTTAAGAAAAAGAAAAATCTTCACCACTTGAGTTTTGATTGGGGTCGAGCTGCTGATACAGATAATTCCCAGCATGAGAAAAACATACTTGACAAGCTTCAACCACATACCAACTTGGAAGTACTTGACATTCTACATTATACAGGTACACAATTTCCAACTTGGCTGGGAGATTGTTCATTCTTCCACCTAGTCTGTCTGTCACTTAAACAATGTAAATACTGCTACATATTGCCACCACTTGGGCAGCTTCCTTCTTTGAAAGAACTTCATATTTCAAAGTTTAAGAGTCTAGTTAGCATTGGACCAGAATTCTATGGAGTTGGTTGTAGTGCAGGGAATCAGCCTTTTCCTTGTCTTGAAATTCTGACATTTTATAGTATGCCAGCATGGGAGAAATGGAATCATGAAGTTGACCATGAAAGTTGCAGGGCTTTCCCTTGTCTTAGAGAGCTTCATCTGGAGGAATGTCCAATTCTACTTGGGAACTTGCCTAGTTGTCTTCCATCTCTTACAAATCTTACCATGAGATACTGTAATCAGCTTGCCACTTCACTTCCGAGTGCTCCCTCTATGCTCACATTACATATAGACAATTGTTGGAAAGTAGAATTCCTTGAACAAGTAAATGGGTGCTACCAGTCACTTGAATCATTAGAGATGCACAATAGTTGCCACTCTCTCAAGTCATTCCCACTAGATTTCTTTCCCAACCTGAACTCTCTGGTCATCTGGGGGTGTGAAAATCTGGAATGTCTAACTGCTTCAACTTCACAACCATTTGAGTTCCTCACTTCTCTCCATTCATTGTGTATATGGAGATGTCCAAATTTTGTAACTTTTCCAGATGGAGGATTGCCCACACCCAATCTCATGTCTTTGAAGGTCCGTTACTGCAACAAGTTAAGGTCACTTCCTGAAGGAATGCACAGTATTCTCCTGAGTTTAAAGGAACTCCAGGTATGGAATTGTCCAGAAATTGAGTCACTTCCTAGTGGGGGTTTTCCTATTAATTTGGAATCACTCAAGATCAGGGCTTGTGAAAAACTCGTTTCCAACCGGATGGATTGGAATATGTCATGTTTAACCTCCCTTGTGCACTTTTCTATTGAGGGAAGATGTGAAGATGTTGAGTCCTTTCCAGAGGAAGGTTTGCTGCCTCCCACTCTTACCCAGCTAGAGATTCAGGGATTATCAAATCTCAAAACATTGGACATCAGAGGGCTTCAACACCTCACATCTCTCAAGAAACTGCAGATCCTTGATTGTTGTATGCTTGAGTCAATAGGAGAAGGTACCTTGCCTATCTCTACAGTTGATCTTGACATATGGAAGTGTCCTTTACTGCAACAACAGCGGGAGAGTGAGAACAGGCCCAAGATTTCTGACCCTGGAATTTGGATCTGTGACAGATACATTAGATTGGATGAGCAGCAGGACTTGTAA 3573 0.3915 MVLEVVGGAFLGAVFNVLLDKIASPEVVSFLKGKRLDYRLLKKLKLLLLSLNGVLDDAEGKQITNAAVKEWLDELKDAAYEADGLLDEIFTSAKYGACEVRNFDSTWSSYDKELEENMEEIIDKLDFIANQKDVLGLTGGVGVKLSQKTPTTSLIEGSNVYGRDYDKEFLINLLFDVESGDNKIGVIPIVGMAGIGKTTLAQLVYNDDTVKENFDLRAWVCVSEEFDIFKITETVLEILTMCNYGIRNLNSLQLELKKRLMGKKYLFVLDDVWNENYVDWDILRTLFQYGAHGSKIIVTTRSEHVASIMQTIPSYHLRYLSDDDCWMLFAKHAFDYRNSRTNRLLEEMGKEIAKRCKGLPLAAKTLGGLLRSKTDIKEWDNILNSDIWEFSDTMSNILPALRLSYYYLPSHLKRCFAYCSIFPKGYEFDKEELVLLWMVENLLQEPRRNKRIEEVGDEYFHELVSWSFFQQSRNNQSLFVMHDLINDLAQHVSGKFCVRLENNSNEDAEKRTRHLSQVIACRYPSINFEAFHKAKGLRTCLQLSLVDPPICLFNKVPHDLLTKLGCLRVLSLVGARGSVNELLLFIGKLRHLRYLDVSQTQIKKLPSAISTLYNLQTLKAVRCPNITQLPRNMHCLVNLRYLDITGAHLEGMPLHISKLKSLQKLSNFVVGKEHASSIAELGELSHLGGSLHIQNLKYVVNPKDAMKARFKKKKNLHHLSFDWGRAADTDNSQHEKNILDKLQPHTNLEVLDILHYTGTQFPTWLGDCSFFHLVCLSLKQCKYCYILPPLGQLPSLKELHISKFKSLVSIGPEFYGVGCSAGNQPFPCLEILTFYSMPAWEKWNHEVDHESCRAFPCLRELHLEECPILLGNLPSCLPSLTNLTMRYCNQLATSLPSAPSMLTLHIDNCWKVEFLEQVNGCYQSLESLEMHNSCHSLKSFPLDFFPNLNSLVIWGCENLECLTASTSQPFEFLTSLHSLCIWRCPNFVTFPDGGLPTPNLMSLKVRYCNKLRSLPEGMHSILLSLKELQVWNCPEIESLPSGGFPINLESLKIRACEKLVSNRMDWNMSCLTSLVHFSIEGRCEDVESFPEEGLLPPTLTQLEIQGLSNLKTLDIRGLQHLTSLKKLQILDCCMLESIGEGTLPISTVDLDIWKCPLLQQQRESENRPKISDPGIWICDRYIRLDEQQDL. 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07028 1190 SUPERFAMILY L domain-like 480 891 - -
Seca3g07028 1190 Pfam NB-ARC domain 165 405 IPR002182 GO:0043531
Seca3g07028 1190 Gene3D Ribonuclease Inhibitor 1044 1163 IPR032675 -
Seca3g07028 1190 Gene3D Ribonuclease Inhibitor 881 1043 IPR032675 -
Seca3g07028 1190 PRINTS Disease resistance protein signature 259 273 - -
Seca3g07028 1190 PRINTS Disease resistance protein signature 791 807 - -
Seca3g07028 1190 PRINTS Disease resistance protein signature 356 370 - -
Seca3g07028 1190 PRINTS Disease resistance protein signature 186 201 - -
Seca3g07028 1190 SUPERFAMILY L domain-like 852 1156 - -
Seca3g07028 1190 Coils Coil 111 131 - -
Seca3g07028 1190 Gene3D - 18 130 - -
Seca3g07028 1190 Gene3D - 144 313 IPR027417 -
Seca3g07028 1190 Pfam Rx N-terminal domain 10 94 IPR041118 -
Seca3g07028 1190 Gene3D Ribonuclease Inhibitor 503 880 IPR032675 -
Seca3g07028 1190 FunFam Probable disease resistance protein At1g61300 143 312 - -
Seca3g07028 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 419 IPR027417 -
Seca3g07028 1190 Gene3D - 404 492 IPR036388 -
Seca3g07028 1190 Gene3D - 319 403 IPR042197 -
Seca3g07028 1190 PANTHER DISEASE RESISTANCE PROTEIN RP 41 866 IPR044974 GO:0006952
Seca3g07028 1190 FunFam Probable disease resistance protein At1g63360 405 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07028 Seca-Chr3 166061628 166070214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07028 159 320 WRKY Transcription Factor Family AT4G12020 28.324 1.44e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07028 - - pcin:129314097 1746.87