Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07016 ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAGATAATGTTCTATTGTCAAATCCAGAGTCATCTAGCAATTTTCAAGCTTCAACATCAGTGAATACAGTTAATGAATTGTCTAGGAGCACCAGAACATGCACTCACACTCACACTTGCAACCCACCTGGTCCTGATGCTGCTCACACACACACATGCTATCACACACACACTCAAGTTTTTGCTTCTGAAGATGATACCAACTCAAAACCAAAAAGGCCTTCTGGCAACAGAGAAGCAGTTCGAAAGTATAGGGAGAAGAAGAAGGCACACACAGCTTACTTGGAGGAGGAGGTTAAAAAATTGCGTCTAGTGAATCAGCAACTAGTCAGGAAACTACAGGGGCAGGCACTTCTTGAAGCAGAGTTGTCAAGGTTGAGGAACATTTTGGGACACCTTAAGGGGAAAATAGACAGTGAATTGGGTGCTTTCCCTTTTCAAAAACAATGTAATTCTTCTCTTTTAAAAGAAAGGGATACCGGTTTGCTTTCCACTCCGCAGACAATTGGTCTTCAGTGTCAGAACAATTTGCCATGCTTCCACCCACATGCAGGATCATCATCCAAGGTTGATATTTGTGCATACAGAAAACCCATGATTCCATGTGAAGGAAGCTGTCAACCTGAAATTGTGGATTGTCAAGTAGATGCAAATAACATGACCAGTACTGAAGGACAAACTCGGGACACAGTGGATAACTTCATGTCATCTGCATCTCAAGATGGATGA 765 0.4222 MDDGNAELSDKLSDNVLLSNPESSSNFQASTSVNTVNELSRSTRTCTHTHTCNPPGPDAAHTHTCYHTHTQVFASEDDTNSKPKRPSGNREAVRKYREKKKAHTAYLEEEVKKLRLVNQQLVRKLQGQALLEAELSRLRNILGHLKGKIDSELGAFPFQKQCNSSLLKERDTGLLSTPQTIGLQCQNNLPCFHPHAGSSSKVDICAYRKPMIPCEGSCQPEIVDCQVDANNMTSTEGQTRDTVDNFMSSASQDG. 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07016 254 CDD bZIP 89 136 - -
Seca3g07016 254 MobiDBLite consensus disorder prediction 1 36 - -
Seca3g07016 254 Gene3D - 69 145 - -
Seca3g07016 254 MobiDBLite consensus disorder prediction 12 36 - -
Seca3g07016 254 SUPERFAMILY Leucine zipper domain 84 126 IPR046347 GO:0003700|GO:0006355
Seca3g07016 254 PANTHER CCAAT/ENHANCER BINDING PROTEIN 15 157 IPR031106 GO:0003700|GO:0006351
Seca3g07016 254 Pfam Basic region leucine zipper 79 134 IPR004827 GO:0003700|GO:0006355
Seca3g07016 254 SMART brlzneu 75 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07016 Seca-Chr3 165611886 165612650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07016 1 160 bZIP Transcription Factor Family AT2G16770 51.515 3.36e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca3g07016 bZIP_2 7.7e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07016 K25785 - gmx:100527780 365.54