Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06988 ATGGTGTGCATAAGGAAGGCGACGGTGAACGACCTACTGGCGATGCAGGCTTGCAACCTCTTCTGCCTGCCTGAGAACTATCAGATGAAGTACTACCTTTATCACATCCTCTCTTGGCCTCAACTTCTTTACGTCGCCGAGGACTACAACGGCCGCATCGTCGGCTACGTCCTCGCCAAGATGGAAGAGGAAACCAACGAGTGCCACGGCCACATCACCTCCCTCGCCGTCCTCCGCACCCACCGCAAACTCGGCCTCGCCACCAAGCTCATGACCGCCGCCCAGAACGCCATGGAACAGGTTGTGTTTGGTGCCGAATATGTCTCGCTGCACGTCAGGAAGAGTAACCGTGCTGCGTTTAATTTGTACACCGAGACCTTAGGGTATAAGATTCATGATGTGGAGGCCAAGTATTATGCAGACGGGGAGGATGCTTATGACATGAGGAAGCAGCTCAAGGGGAAGCAGATGCATCAGCATCAACATCAACATCAACATCATCACCATCACCATCATCACCACCACCACCATCATCATGAGCATGGTGGTGGCTGTTGTTCTGGGGACGCGAAGCCAGACAAGGCAGAGACTAAGGGGAATGCAAAGGCCAACTGA 615 0.5366 MVCIRKATVNDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETNECHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQMHQHQHQHQHHHHHHHHHHHHHHEHGGGCCSGDAKPDKAETKGNAKAN. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06988 204 MobiDBLite consensus disorder prediction 152 204 - -
Seca3g06988 204 Gene3D - 2 187 - -
Seca3g06988 204 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 153 IPR000182 GO:0016747
Seca3g06988 204 CDD NAT_SF 43 111 - -
Seca3g06988 204 FunFam N-alpha-acetyltransferase daf-31-like 2 185 - -
Seca3g06988 204 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 180 IPR045047 GO:0004596|GO:0006474|GO:0031415
Seca3g06988 204 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 173 IPR016181 -
Seca3g06988 204 MobiDBLite consensus disorder prediction 182 204 - -
Seca3g06988 204 MobiDBLite consensus disorder prediction 155 181 - -
Seca3g06988 204 Pfam Acetyltransferase (GNAT) family 39 129 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06988 Seca-Chr3 164553618 164554459 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca3g06988 Acetyltransf_1 1.5e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06988 K20791 - zju:125422461 330.487