Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06983 ATGGCCGTTGCTGGAGAAGTTTCACTAGATGAGCATGATATGGATTTTGATCAATTTGGAATACTTATAAAAGTGAAATTCAGACAAAATGGACAGCTTGAAAATCTCAGTGCCCATCATCAATCTGGAGGGGAACGTTCAGTTTCAACTATTGTCTATCTTGTTTCCCTTCAAGATCTTACAAACTGCCCATTTAGAGTTGTTGATGAGATCAACCAAGGGATGGACCCAATAAATGAAAGGAAGATGTTCCAGCAACTAGTTAGAGCAGCGAGCAAGCCAAATACACCACAGTGTTTCTTGCTTACCCCGAAGTTGTTACCAGATCTGCAGTATAGTGAGGCATGCAGTATATTAAATGTAATGAATGGCCCTTGGATTGAGCAACCCTCGAAGGTCTGGACTACTGGTGATCGATGGAGCATAATCACGGAACACATTGGAGATACCTTGTGTTAA 459 0.4139 MAVAGEVSLDEHDMDFDQFGILIKVKFRQNGQLENLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTTGDRWSIITEHIGDTLC. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06983 152 Gene3D - 1 124 IPR027417 -
Seca3g06983 152 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 141 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Seca3g06983 152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 103 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06983 Seca-Chr3 164159048 164160766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06983 1 140 Structural Maintenance of Chromosomes family AT5G15920 85.714 8.94e-85 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06983 K22803 - gmx:100778678 297.745