LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca3g06967	ATGGATTTAAATAGTGATGATTCGGCTGTTAATCTGGATGATGATAGAGACCTTAGTTTTAGTGATTCTTCTAGCTCTAGCGATGATGAAATTCATAATGAAAATGATAGAGTTATTGATTCTGATGAAGTTAATGAAGAAGAGGGAGACAATGATCAGGGAAATGATATTATGGATGCAGAAGTTGGATGGGGTGTGTCAAGGAGGATAATTGATTTGACAATTGATGATATATGTGCATTGGAATTCTGTAGTGAAAATGATGTTTTCAATTTTTACTTTTCTTATGCAAGATGTCATGGTTTTGCTGTGAGGAGGGATGATGTAATTAAAGACAGTAAAGGTATGCTCATAATGCAACAGTTCTTATGTAGTAGGGCTGGTTTGAGGGACAAAAAGCATTTGATTAGGTTAGATCGGAAAAAGGAACATAGGCCTTTAACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGGTTTGATTATAAGACTGGGAAATATAAGGTTGTTTCCTTTTTAGACTCCCATAACCATGAATTGACCCCTGCTAAATTTGTACCTTTAATTCCTGCATATCGTGGTTTGAGTGATGGGGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCATGTCAGATAATGGGTTTTCTTGTTGATCAAAAAGGAGGTTATAGAAACGTTGGTTTTTCAAAGAAAGATTTATACAACTACATAGATGAGGTTAAGAGGGGTAAGATAAAAGATGGGGATGCAGTGGTTGGGTTAAGTTATTTGCAAGGAAAGGCAGATAATAATCCAATGTTTTTTTTCAAGATTTTTATGTTCTGA	837	0.356	MDLNSDDSAVNLDDDRDLSFSDSSSSSDDEIHNENDRVIDSDEVNEEEGDNDQGNDIMDAEVGWGVSRRIIDLTIDDICALEFCSENDVFNFYFSYARCHGFAVRRDDVIKDSKGMLIMQQFLCSRAGLRDKKHLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKYKVVSFLDSHNHELTPAKFVPLIPAYRGLSDGDKAQVDALHSHGVRPCQIMGFLVDQKGGYRNVGFSKKDLYNYIDEVKRGKIKDGDAVVGLSYLQGKADNNPMFFFKIFMF.	279

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca3g06967	278	MobiDBLite	consensus disorder prediction	40	55	-	-
	Seca3g06967	278	MobiDBLite	consensus disorder prediction	1	58	-	-
	Seca3g06967	278	MobiDBLite	consensus disorder prediction	9	39	-	-
	Seca3g06967	278	Pfam	FAR1 DNA-binding domain	91	181	IPR004330	-
	Seca3g06967	278	PANTHER	OS01G0519700 PROTEIN	79	275	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca3g06967	Seca-Chr3	163697543	163698379	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca3g06967		FAR1	3.9e-20	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca3g06967	-		-	ccaj:109794460	280.026